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7a95938899
Summary: FragmentedRangeTombstoneList has a member variable `seq_set_` that contains the sequence numbers of all range tombstones in a set. The set is constructed in `FragmentTombstones()` and is used only in `FragmentedRangeTombstoneList::ContainsRange()` which only happens during compaction. This PR moves the initialization of `seq_set_` to `FragmentedRangeTombstoneList::ContainsRange()`. This should speed up `FragmentTombstones()` when the range tombstone list is used for read/scan requests. Microbench shows the speed improvement to be ~45%. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10848 Test Plan: - Existing tests and stress test: `python3 tools/db_crashtest.py whitebox --simple --verify_iterator_with_expected_state_one_in=5`. - Microbench: update `range_del_aggregator_bench` to benchmark speed of `FragmentTombstones()`: ``` ./range_del_aggregator_bench --num_range_tombstones=1000 --tombstone_start_upper_bound=50000000 --num_runs=10000 --tombstone_width_mean=200 --should_deletes_per_run=100 --use_compaction_range_del_aggregator=true Before this PR: ========================= Fragment Tombstones: 270.286 us AddTombstones: 1.28933 us ShouldDelete (first): 0.525528 us ShouldDelete (rest): 0.0797519 us After this PR: time to fragment tombstones is pushed to AddTombstones() which only happen during compaction. ========================= Fragment Tombstones: 149.879 us AddTombstones: 102.131 us ShouldDelete (first): 0.565871 us ShouldDelete (rest): 0.0729444 us ``` - db_bench: this should improve speed for fragmenting range tombstones for mutable memtable: ``` ./db_bench --benchmarks=readwhilewriting --writes_per_range_tombstone=100 --max_write_buffer_number=100 --min_write_buffer_number_to_merge=100 --writes=500000 --reads=250000 --disable_auto_compactions --max_num_range_tombstones=100000 --finish_after_writes --write_buffer_size=1073741824 --threads=25 Before this PR: readwhilewriting : 18.301 micros/op 1310445 ops/sec 4.769 seconds 6250000 operations; 28.1 MB/s (41001 of 250000 found) After this PR: readwhilewriting : 16.943 micros/op 1439376 ops/sec 4.342 seconds 6250000 operations; 23.8 MB/s (28977 of 250000 found) ``` Reviewed By: ajkr Differential Revision: D40646227 Pulled By: cbi42 fbshipit-source-id: ea471667edb258f67d01cfd828588e80a89e4083
503 lines
18 KiB
C++
503 lines
18 KiB
C++
// Copyright (c) 2018-present, Facebook, Inc. All rights reserved.
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// This source code is licensed under both the GPLv2 (found in the
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// COPYING file in the root directory) and Apache 2.0 License
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// (found in the LICENSE.Apache file in the root directory).
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#include "db/range_tombstone_fragmenter.h"
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#include <algorithm>
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#include <cinttypes>
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#include <cstdio>
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#include <functional>
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#include <set>
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#include "util/autovector.h"
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#include "util/kv_map.h"
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#include "util/vector_iterator.h"
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namespace ROCKSDB_NAMESPACE {
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FragmentedRangeTombstoneList::FragmentedRangeTombstoneList(
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std::unique_ptr<InternalIterator> unfragmented_tombstones,
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const InternalKeyComparator& icmp, bool for_compaction,
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const std::vector<SequenceNumber>& snapshots) {
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if (unfragmented_tombstones == nullptr) {
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return;
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}
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bool is_sorted = true;
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InternalKey pinned_last_start_key;
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Slice last_start_key;
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num_unfragmented_tombstones_ = 0;
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total_tombstone_payload_bytes_ = 0;
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for (unfragmented_tombstones->SeekToFirst(); unfragmented_tombstones->Valid();
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unfragmented_tombstones->Next(), num_unfragmented_tombstones_++) {
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total_tombstone_payload_bytes_ += unfragmented_tombstones->key().size() +
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unfragmented_tombstones->value().size();
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if (num_unfragmented_tombstones_ > 0 &&
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icmp.Compare(last_start_key, unfragmented_tombstones->key()) > 0) {
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is_sorted = false;
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break;
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}
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if (unfragmented_tombstones->IsKeyPinned()) {
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last_start_key = unfragmented_tombstones->key();
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} else {
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pinned_last_start_key.DecodeFrom(unfragmented_tombstones->key());
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last_start_key = pinned_last_start_key.Encode();
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}
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}
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if (is_sorted) {
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FragmentTombstones(std::move(unfragmented_tombstones), icmp, for_compaction,
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snapshots);
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return;
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}
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// Sort the tombstones before fragmenting them.
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std::vector<std::string> keys, values;
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keys.reserve(num_unfragmented_tombstones_);
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values.reserve(num_unfragmented_tombstones_);
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// Reset the counter to zero for the next iteration over keys.
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total_tombstone_payload_bytes_ = 0;
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for (unfragmented_tombstones->SeekToFirst(); unfragmented_tombstones->Valid();
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unfragmented_tombstones->Next()) {
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total_tombstone_payload_bytes_ += unfragmented_tombstones->key().size() +
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unfragmented_tombstones->value().size();
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keys.emplace_back(unfragmented_tombstones->key().data(),
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unfragmented_tombstones->key().size());
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values.emplace_back(unfragmented_tombstones->value().data(),
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unfragmented_tombstones->value().size());
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}
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// VectorIterator implicitly sorts by key during construction.
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auto iter = std::make_unique<VectorIterator>(std::move(keys),
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std::move(values), &icmp);
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FragmentTombstones(std::move(iter), icmp, for_compaction, snapshots);
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}
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void FragmentedRangeTombstoneList::FragmentTombstones(
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std::unique_ptr<InternalIterator> unfragmented_tombstones,
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const InternalKeyComparator& icmp, bool for_compaction,
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const std::vector<SequenceNumber>& snapshots) {
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Slice cur_start_key(nullptr, 0);
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auto cmp = ParsedInternalKeyComparator(&icmp);
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// Stores the end keys and sequence numbers of range tombstones with a start
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// key less than or equal to cur_start_key. Provides an ordering by end key
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// for use in flush_current_tombstones.
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std::set<ParsedInternalKey, ParsedInternalKeyComparator> cur_end_keys(cmp);
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size_t ts_sz = icmp.user_comparator()->timestamp_size();
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// Given the next start key in unfragmented_tombstones,
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// flush_current_tombstones writes every tombstone fragment that starts
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// and ends with a key before next_start_key, and starts with a key greater
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// than or equal to cur_start_key.
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auto flush_current_tombstones = [&](const Slice& next_start_key) {
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auto it = cur_end_keys.begin();
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bool reached_next_start_key = false;
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for (; it != cur_end_keys.end() && !reached_next_start_key; ++it) {
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Slice cur_end_key = it->user_key;
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if (icmp.user_comparator()->CompareWithoutTimestamp(cur_start_key,
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cur_end_key) == 0) {
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// Empty tombstone.
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continue;
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}
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if (icmp.user_comparator()->CompareWithoutTimestamp(next_start_key,
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cur_end_key) <= 0) {
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// All the end keys in [it, cur_end_keys.end()) are after
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// next_start_key, so the tombstones they represent can be used in
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// fragments that start with keys greater than or equal to
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// next_start_key. However, the end keys we already passed will not be
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// used in any more tombstone fragments.
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//
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// Remove the fully fragmented tombstones and stop iteration after a
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// final round of flushing to preserve the tombstones we can create more
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// fragments from.
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reached_next_start_key = true;
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cur_end_keys.erase(cur_end_keys.begin(), it);
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cur_end_key = next_start_key;
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}
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// Flush a range tombstone fragment [cur_start_key, cur_end_key), which
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// should not overlap with the last-flushed tombstone fragment.
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assert(tombstones_.empty() ||
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icmp.user_comparator()->CompareWithoutTimestamp(
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tombstones_.back().end_key, cur_start_key) <= 0);
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// Sort the sequence numbers of the tombstones being fragmented in
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// descending order, and then flush them in that order.
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autovector<SequenceNumber> seqnums_to_flush;
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autovector<Slice> timestamps_to_flush;
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for (auto flush_it = it; flush_it != cur_end_keys.end(); ++flush_it) {
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seqnums_to_flush.push_back(flush_it->sequence);
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if (ts_sz) {
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timestamps_to_flush.push_back(
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ExtractTimestampFromUserKey(flush_it->user_key, ts_sz));
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}
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}
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// TODO: bind the two sorting together to be more efficient
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std::sort(seqnums_to_flush.begin(), seqnums_to_flush.end(),
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std::greater<SequenceNumber>());
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if (ts_sz) {
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std::sort(timestamps_to_flush.begin(), timestamps_to_flush.end(),
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[icmp](const Slice& ts1, const Slice& ts2) {
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return icmp.user_comparator()->CompareTimestamp(ts1, ts2) >
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0;
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});
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}
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size_t start_idx = tombstone_seqs_.size();
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size_t end_idx = start_idx + seqnums_to_flush.size();
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// If user-defined timestamp is enabled, we should not drop tombstones
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// from any snapshot stripe. Garbage collection of range tombstones
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// happens in CompactionOutputs::AddRangeDels().
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if (for_compaction && ts_sz == 0) {
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// Drop all tombstone seqnums that are not preserved by a snapshot.
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SequenceNumber next_snapshot = kMaxSequenceNumber;
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for (auto seq : seqnums_to_flush) {
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if (seq <= next_snapshot) {
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// This seqnum is visible by a lower snapshot.
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tombstone_seqs_.push_back(seq);
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auto upper_bound_it =
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std::lower_bound(snapshots.begin(), snapshots.end(), seq);
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if (upper_bound_it == snapshots.begin()) {
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// This seqnum is the topmost one visible by the earliest
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// snapshot. None of the seqnums below it will be visible, so we
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// can skip them.
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break;
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}
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next_snapshot = *std::prev(upper_bound_it);
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}
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}
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end_idx = tombstone_seqs_.size();
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} else {
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// The fragmentation is being done for reads, so preserve all seqnums.
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tombstone_seqs_.insert(tombstone_seqs_.end(), seqnums_to_flush.begin(),
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seqnums_to_flush.end());
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if (ts_sz) {
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tombstone_timestamps_.insert(tombstone_timestamps_.end(),
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timestamps_to_flush.begin(),
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timestamps_to_flush.end());
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}
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}
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assert(start_idx < end_idx);
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if (ts_sz) {
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std::string start_key_with_max_ts;
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AppendUserKeyWithMaxTimestamp(&start_key_with_max_ts, cur_start_key,
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ts_sz);
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pinned_slices_.emplace_back(std::move(start_key_with_max_ts));
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Slice start_key = pinned_slices_.back();
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std::string end_key_with_max_ts;
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AppendUserKeyWithMaxTimestamp(&end_key_with_max_ts, cur_end_key, ts_sz);
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pinned_slices_.emplace_back(std::move(end_key_with_max_ts));
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Slice end_key = pinned_slices_.back();
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// RangeTombstoneStack expects start_key and end_key to have max
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// timestamp.
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tombstones_.emplace_back(start_key, end_key, start_idx, end_idx);
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} else {
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tombstones_.emplace_back(cur_start_key, cur_end_key, start_idx,
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end_idx);
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}
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cur_start_key = cur_end_key;
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}
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if (!reached_next_start_key) {
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// There is a gap between the last flushed tombstone fragment and
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// the next tombstone's start key. Remove all the end keys in
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// the working set, since we have fully fragmented their corresponding
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// tombstones.
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cur_end_keys.clear();
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}
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cur_start_key = next_start_key;
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};
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pinned_iters_mgr_.StartPinning();
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bool no_tombstones = true;
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for (unfragmented_tombstones->SeekToFirst(); unfragmented_tombstones->Valid();
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unfragmented_tombstones->Next()) {
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const Slice& ikey = unfragmented_tombstones->key();
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Slice tombstone_start_key = ExtractUserKey(ikey);
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SequenceNumber tombstone_seq = GetInternalKeySeqno(ikey);
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if (!unfragmented_tombstones->IsKeyPinned()) {
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pinned_slices_.emplace_back(tombstone_start_key.data(),
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tombstone_start_key.size());
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tombstone_start_key = pinned_slices_.back();
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}
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no_tombstones = false;
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Slice tombstone_end_key = unfragmented_tombstones->value();
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if (!unfragmented_tombstones->IsValuePinned()) {
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pinned_slices_.emplace_back(tombstone_end_key.data(),
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tombstone_end_key.size());
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tombstone_end_key = pinned_slices_.back();
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}
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if (!cur_end_keys.empty() &&
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icmp.user_comparator()->CompareWithoutTimestamp(
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cur_start_key, tombstone_start_key) != 0) {
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// The start key has changed. Flush all tombstones that start before
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// this new start key.
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flush_current_tombstones(tombstone_start_key);
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}
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cur_start_key = tombstone_start_key;
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cur_end_keys.emplace(tombstone_end_key, tombstone_seq, kTypeRangeDeletion);
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}
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if (!cur_end_keys.empty()) {
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ParsedInternalKey last_end_key = *std::prev(cur_end_keys.end());
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flush_current_tombstones(last_end_key.user_key);
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}
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if (!no_tombstones) {
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pinned_iters_mgr_.PinIterator(unfragmented_tombstones.release(),
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false /* arena */);
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}
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}
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bool FragmentedRangeTombstoneList::ContainsRange(SequenceNumber lower,
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SequenceNumber upper) {
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std::call_once(seq_set_init_once_flag_, [this]() {
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for (auto s : tombstone_seqs_) {
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seq_set_.insert(s);
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}
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});
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auto seq_it = seq_set_.lower_bound(lower);
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return seq_it != seq_set_.end() && *seq_it <= upper;
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}
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FragmentedRangeTombstoneIterator::FragmentedRangeTombstoneIterator(
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FragmentedRangeTombstoneList* tombstones, const InternalKeyComparator& icmp,
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SequenceNumber _upper_bound, const Slice* ts_upper_bound,
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SequenceNumber _lower_bound)
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: tombstone_start_cmp_(icmp.user_comparator()),
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tombstone_end_cmp_(icmp.user_comparator()),
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icmp_(&icmp),
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ucmp_(icmp.user_comparator()),
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tombstones_(tombstones),
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upper_bound_(_upper_bound),
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lower_bound_(_lower_bound),
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ts_upper_bound_(ts_upper_bound) {
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assert(tombstones_ != nullptr);
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Invalidate();
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}
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FragmentedRangeTombstoneIterator::FragmentedRangeTombstoneIterator(
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const std::shared_ptr<FragmentedRangeTombstoneList>& tombstones,
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const InternalKeyComparator& icmp, SequenceNumber _upper_bound,
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const Slice* ts_upper_bound, SequenceNumber _lower_bound)
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: tombstone_start_cmp_(icmp.user_comparator()),
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tombstone_end_cmp_(icmp.user_comparator()),
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icmp_(&icmp),
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ucmp_(icmp.user_comparator()),
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tombstones_ref_(tombstones),
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tombstones_(tombstones_ref_.get()),
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upper_bound_(_upper_bound),
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lower_bound_(_lower_bound),
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ts_upper_bound_(ts_upper_bound) {
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assert(tombstones_ != nullptr);
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Invalidate();
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}
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FragmentedRangeTombstoneIterator::FragmentedRangeTombstoneIterator(
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const std::shared_ptr<FragmentedRangeTombstoneListCache>& tombstones_cache,
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const InternalKeyComparator& icmp, SequenceNumber _upper_bound,
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const Slice* ts_upper_bound, SequenceNumber _lower_bound)
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: tombstone_start_cmp_(icmp.user_comparator()),
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tombstone_end_cmp_(icmp.user_comparator()),
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icmp_(&icmp),
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ucmp_(icmp.user_comparator()),
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tombstones_cache_ref_(tombstones_cache),
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tombstones_(tombstones_cache_ref_->tombstones.get()),
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upper_bound_(_upper_bound),
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lower_bound_(_lower_bound) {
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assert(tombstones_ != nullptr);
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if (!ts_upper_bound || ts_upper_bound->empty()) {
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ts_upper_bound_ = nullptr;
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} else {
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ts_upper_bound_ = ts_upper_bound;
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}
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Invalidate();
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}
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void FragmentedRangeTombstoneIterator::SeekToFirst() {
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pos_ = tombstones_->begin();
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seq_pos_ = tombstones_->seq_begin();
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}
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void FragmentedRangeTombstoneIterator::SeekToTopFirst() {
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if (tombstones_->empty()) {
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Invalidate();
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return;
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}
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pos_ = tombstones_->begin();
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SetMaxVisibleSeqAndTimestamp();
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ScanForwardToVisibleTombstone();
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}
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void FragmentedRangeTombstoneIterator::SeekToLast() {
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pos_ = std::prev(tombstones_->end());
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seq_pos_ = std::prev(tombstones_->seq_end());
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}
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void FragmentedRangeTombstoneIterator::SeekToTopLast() {
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if (tombstones_->empty()) {
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Invalidate();
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return;
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}
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pos_ = std::prev(tombstones_->end());
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SetMaxVisibleSeqAndTimestamp();
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ScanBackwardToVisibleTombstone();
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}
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// @param `target` is a user key, with timestamp if user-defined timestamp is
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// enabled.
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void FragmentedRangeTombstoneIterator::Seek(const Slice& target) {
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if (tombstones_->empty()) {
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Invalidate();
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return;
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}
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SeekToCoveringTombstone(target);
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ScanForwardToVisibleTombstone();
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}
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void FragmentedRangeTombstoneIterator::SeekForPrev(const Slice& target) {
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if (tombstones_->empty()) {
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Invalidate();
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return;
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}
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SeekForPrevToCoveringTombstone(target);
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ScanBackwardToVisibleTombstone();
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}
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void FragmentedRangeTombstoneIterator::SeekToCoveringTombstone(
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const Slice& target) {
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pos_ = std::upper_bound(tombstones_->begin(), tombstones_->end(), target,
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tombstone_end_cmp_);
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if (pos_ == tombstones_->end()) {
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// All tombstones end before target.
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seq_pos_ = tombstones_->seq_end();
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return;
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}
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SetMaxVisibleSeqAndTimestamp();
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}
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void FragmentedRangeTombstoneIterator::SeekForPrevToCoveringTombstone(
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const Slice& target) {
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if (tombstones_->empty()) {
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Invalidate();
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return;
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}
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pos_ = std::upper_bound(tombstones_->begin(), tombstones_->end(), target,
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tombstone_start_cmp_);
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if (pos_ == tombstones_->begin()) {
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// All tombstones start after target.
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Invalidate();
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return;
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}
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--pos_;
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SetMaxVisibleSeqAndTimestamp();
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}
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void FragmentedRangeTombstoneIterator::ScanForwardToVisibleTombstone() {
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while (pos_ != tombstones_->end() &&
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(seq_pos_ == tombstones_->seq_iter(pos_->seq_end_idx) ||
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*seq_pos_ < lower_bound_)) {
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++pos_;
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if (pos_ == tombstones_->end()) {
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Invalidate();
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return;
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}
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SetMaxVisibleSeqAndTimestamp();
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}
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}
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void FragmentedRangeTombstoneIterator::ScanBackwardToVisibleTombstone() {
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while (pos_ != tombstones_->end() &&
|
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(seq_pos_ == tombstones_->seq_iter(pos_->seq_end_idx) ||
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*seq_pos_ < lower_bound_)) {
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if (pos_ == tombstones_->begin()) {
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Invalidate();
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return;
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|
}
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|
--pos_;
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|
SetMaxVisibleSeqAndTimestamp();
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}
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|
}
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|
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void FragmentedRangeTombstoneIterator::Next() {
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++seq_pos_;
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if (seq_pos_ == tombstones_->seq_iter(pos_->seq_end_idx)) {
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|
++pos_;
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|
}
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|
}
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|
|
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void FragmentedRangeTombstoneIterator::TopNext() {
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|
++pos_;
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|
if (pos_ == tombstones_->end()) {
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|
return;
|
|
}
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|
SetMaxVisibleSeqAndTimestamp();
|
|
ScanForwardToVisibleTombstone();
|
|
}
|
|
|
|
void FragmentedRangeTombstoneIterator::Prev() {
|
|
if (seq_pos_ == tombstones_->seq_begin()) {
|
|
Invalidate();
|
|
return;
|
|
}
|
|
--seq_pos_;
|
|
if (pos_ == tombstones_->end() ||
|
|
seq_pos_ == tombstones_->seq_iter(pos_->seq_start_idx - 1)) {
|
|
--pos_;
|
|
}
|
|
}
|
|
|
|
void FragmentedRangeTombstoneIterator::TopPrev() {
|
|
if (pos_ == tombstones_->begin()) {
|
|
Invalidate();
|
|
return;
|
|
}
|
|
--pos_;
|
|
SetMaxVisibleSeqAndTimestamp();
|
|
ScanBackwardToVisibleTombstone();
|
|
}
|
|
|
|
bool FragmentedRangeTombstoneIterator::Valid() const {
|
|
return tombstones_ != nullptr && pos_ != tombstones_->end();
|
|
}
|
|
|
|
SequenceNumber FragmentedRangeTombstoneIterator::MaxCoveringTombstoneSeqnum(
|
|
const Slice& target_user_key) {
|
|
SeekToCoveringTombstone(target_user_key);
|
|
return ValidPos() && ucmp_->CompareWithoutTimestamp(start_key(),
|
|
target_user_key) <= 0
|
|
? seq()
|
|
: 0;
|
|
}
|
|
|
|
std::map<SequenceNumber, std::unique_ptr<FragmentedRangeTombstoneIterator>>
|
|
FragmentedRangeTombstoneIterator::SplitBySnapshot(
|
|
const std::vector<SequenceNumber>& snapshots) {
|
|
std::map<SequenceNumber, std::unique_ptr<FragmentedRangeTombstoneIterator>>
|
|
splits;
|
|
SequenceNumber lower = 0;
|
|
SequenceNumber upper;
|
|
for (size_t i = 0; i <= snapshots.size(); i++) {
|
|
if (i >= snapshots.size()) {
|
|
upper = kMaxSequenceNumber;
|
|
} else {
|
|
upper = snapshots[i];
|
|
}
|
|
if (tombstones_->ContainsRange(lower, upper)) {
|
|
splits.emplace(upper,
|
|
std::make_unique<FragmentedRangeTombstoneIterator>(
|
|
tombstones_, *icmp_, upper, ts_upper_bound_, lower));
|
|
}
|
|
lower = upper + 1;
|
|
}
|
|
return splits;
|
|
}
|
|
|
|
} // namespace ROCKSDB_NAMESPACE
|