rocksdb/db/repair.cc
Hui Xiao 151242ce46 Group rocksdb.sst.read.micros stat by IOActivity flush and compaction (#11288)
Summary:
**Context:**
The existing stat rocksdb.sst.read.micros does not reflect each of compaction and flush cases but aggregate them, which is not so helpful for us to understand IO read behavior of each of them.

**Summary**
- Update `StopWatch` and `RandomAccessFileReader` to record `rocksdb.sst.read.micros` and `rocksdb.file.{flush/compaction}.read.micros`
   - Fixed the default histogram in `RandomAccessFileReader`
- New field `ReadOptions/IOOptions::io_activity`; Pass `ReadOptions` through paths under db open, flush and compaction to where we can prepare `IOOptions` and pass it to `RandomAccessFileReader`
- Use `thread_status_util` for assertion in `DbStressFSWrapper` for continuous testing on we are passing correct `io_activity` under db open, flush and compaction

Pull Request resolved: https://github.com/facebook/rocksdb/pull/11288

Test Plan:
- **Stress test**
- **Db bench 1: rocksdb.sst.read.micros COUNT ≈ sum of rocksdb.file.read.flush.micros's and rocksdb.file.read.compaction.micros's.**  (without blob)
     - May not be exactly the same due to `HistogramStat::Add` only guarantees atomic not accuracy across threads.
```
./db_bench -db=/dev/shm/testdb/ -statistics=true -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -target_file_size_base=655 -disable_auto_compactions=false -compression_type=none -bloom_bits=3 (-use_plain_table=1 -prefix_size=10)
```
```
// BlockBasedTable
rocksdb.sst.read.micros P50 : 2.009374 P95 : 4.968548 P99 : 8.110362 P100 : 43.000000 COUNT : 40456 SUM : 114805
rocksdb.file.read.flush.micros P50 : 1.871841 P95 : 3.872407 P99 : 5.540541 P100 : 43.000000 COUNT : 2250 SUM : 6116
rocksdb.file.read.compaction.micros P50 : 2.023109 P95 : 5.029149 P99 : 8.196910 P100 : 26.000000 COUNT : 38206 SUM : 108689

// PlainTable
Does not apply
```
- **Db bench 2: performance**

**Read**

SETUP: db with 900 files
```
./db_bench -db=/dev/shm/testdb/ -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655  -disable_auto_compactions=true -target_file_size_base=655 -compression_type=none
```run till convergence
```
./db_bench -seed=1678564177044286 -use_existing_db=true -db=/dev/shm/testdb -benchmarks=readrandom[-X60] -statistics=true -num=1000000 -disable_auto_compactions=true -compression_type=none -bloom_bits=3
```
Pre-change
`readrandom [AVG 60 runs] : 21568 (± 248) ops/sec`
Post-change (no regression, -0.3%)
`readrandom [AVG 60 runs] : 21486 (± 236) ops/sec`

**Compaction/Flush**run till convergence
```
./db_bench -db=/dev/shm/testdb2/ -seed=1678564177044286 -benchmarks="fillseq[-X60]" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655  -disable_auto_compactions=false -target_file_size_base=655 -compression_type=none

rocksdb.sst.read.micros  COUNT : 33820
rocksdb.sst.read.flush.micros COUNT : 1800
rocksdb.sst.read.compaction.micros COUNT : 32020
```
Pre-change
`fillseq [AVG 46 runs] : 1391 (± 214) ops/sec;    0.7 (± 0.1) MB/sec`

Post-change (no regression, ~-0.4%)
`fillseq [AVG 46 runs] : 1385 (± 216) ops/sec;    0.7 (± 0.1) MB/sec`

Reviewed By: ajkr

Differential Revision: D44007011

Pulled By: hx235

fbshipit-source-id: a54c89e4846dfc9a135389edf3f3eedfea257132
2023-04-21 09:07:18 -07:00

825 lines
30 KiB
C++

// Copyright (c) 2011-present, Facebook, Inc. All rights reserved.
// This source code is licensed under both the GPLv2 (found in the
// COPYING file in the root directory) and Apache 2.0 License
// (found in the LICENSE.Apache file in the root directory).
//
// Copyright (c) 2011 The LevelDB Authors. All rights reserved.
// Use of this source code is governed by a BSD-style license that can be
// found in the LICENSE file. See the AUTHORS file for names of contributors.
//
// Repairer does best effort recovery to recover as much data as possible after
// a disaster without compromising consistency. It does not guarantee bringing
// the database to a time consistent state.
//
// Repair process is broken into 4 phases:
// (a) Find files
// (b) Convert logs to tables
// (c) Extract metadata
// (d) Write Descriptor
//
// (a) Find files
//
// The repairer goes through all the files in the directory, and classifies them
// based on their file name. Any file that cannot be identified by name will be
// ignored.
//
// (b) Convert logs to table
//
// Every log file that is active is replayed. All sections of the file where the
// checksum does not match is skipped over. We intentionally give preference to
// data consistency.
//
// (c) Extract metadata
//
// We scan every table to compute
// (1) smallest/largest for the table
// (2) largest sequence number in the table
// (3) oldest blob file referred to by the table (if applicable)
//
// If we are unable to scan the file, then we ignore the table.
//
// (d) Write Descriptor
//
// We generate descriptor contents:
// - log number is set to zero
// - next-file-number is set to 1 + largest file number we found
// - last-sequence-number is set to largest sequence# found across
// all tables (see 2c)
// - compaction pointers are cleared
// - every table file is added at level 0
//
// Possible optimization 1:
// (a) Compute total size and use to pick appropriate max-level M
// (b) Sort tables by largest sequence# in the table
// (c) For each table: if it overlaps earlier table, place in level-0,
// else place in level-M.
// (d) We can provide options for time consistent recovery and unsafe recovery
// (ignore checksum failure when applicable)
// Possible optimization 2:
// Store per-table metadata (smallest, largest, largest-seq#, ...)
// in the table's meta section to speed up ScanTable.
#include "db/version_builder.h"
#include <cinttypes>
#include "db/builder.h"
#include "db/db_impl/db_impl.h"
#include "db/dbformat.h"
#include "db/log_reader.h"
#include "db/log_writer.h"
#include "db/memtable.h"
#include "db/table_cache.h"
#include "db/version_edit.h"
#include "db/write_batch_internal.h"
#include "file/filename.h"
#include "file/writable_file_writer.h"
#include "logging/logging.h"
#include "options/cf_options.h"
#include "rocksdb/comparator.h"
#include "rocksdb/db.h"
#include "rocksdb/env.h"
#include "rocksdb/options.h"
#include "rocksdb/write_buffer_manager.h"
#include "table/scoped_arena_iterator.h"
#include "table/unique_id_impl.h"
#include "util/string_util.h"
namespace ROCKSDB_NAMESPACE {
namespace {
class Repairer {
public:
Repairer(const std::string& dbname, const DBOptions& db_options,
const std::vector<ColumnFamilyDescriptor>& column_families,
const ColumnFamilyOptions& default_cf_opts,
const ColumnFamilyOptions& unknown_cf_opts, bool create_unknown_cfs)
: dbname_(dbname),
db_session_id_(DBImpl::GenerateDbSessionId(db_options.env)),
env_(db_options.env),
file_options_(),
db_options_(SanitizeOptions(dbname_, db_options)),
immutable_db_options_(ImmutableDBOptions(db_options_)),
icmp_(default_cf_opts.comparator),
default_cf_opts_(
SanitizeOptions(immutable_db_options_, default_cf_opts)),
default_iopts_(
ImmutableOptions(immutable_db_options_, default_cf_opts_)),
unknown_cf_opts_(
SanitizeOptions(immutable_db_options_, unknown_cf_opts)),
create_unknown_cfs_(create_unknown_cfs),
raw_table_cache_(
// TableCache can be small since we expect each table to be opened
// once.
NewLRUCache(10, db_options_.table_cache_numshardbits)),
table_cache_(new TableCache(default_iopts_, &file_options_,
raw_table_cache_.get(),
/*block_cache_tracer=*/nullptr,
/*io_tracer=*/nullptr, db_session_id_)),
wb_(db_options_.db_write_buffer_size),
wc_(db_options_.delayed_write_rate),
vset_(dbname_, &immutable_db_options_, file_options_,
raw_table_cache_.get(), &wb_, &wc_,
/*block_cache_tracer=*/nullptr, /*io_tracer=*/nullptr,
/*db_id=*/"", db_session_id_),
next_file_number_(1),
db_lock_(nullptr),
closed_(false) {
for (const auto& cfd : column_families) {
cf_name_to_opts_[cfd.name] = cfd.options;
}
}
const ColumnFamilyOptions* GetColumnFamilyOptions(
const std::string& cf_name) {
if (cf_name_to_opts_.find(cf_name) == cf_name_to_opts_.end()) {
if (create_unknown_cfs_) {
return &unknown_cf_opts_;
}
return nullptr;
}
return &cf_name_to_opts_[cf_name];
}
// Adds a column family to the VersionSet with cf_options_ and updates
// manifest.
Status AddColumnFamily(const std::string& cf_name, uint32_t cf_id) {
// TODO: plumb Env::IOActivity;
const ReadOptions read_options;
const auto* cf_opts = GetColumnFamilyOptions(cf_name);
if (cf_opts == nullptr) {
return Status::Corruption("Encountered unknown column family with name=" +
cf_name + ", id=" + std::to_string(cf_id));
}
Options opts(db_options_, *cf_opts);
MutableCFOptions mut_cf_opts(opts);
VersionEdit edit;
edit.SetComparatorName(opts.comparator->Name());
edit.SetLogNumber(0);
edit.SetColumnFamily(cf_id);
ColumnFamilyData* cfd;
cfd = nullptr;
edit.AddColumnFamily(cf_name);
mutex_.Lock();
std::unique_ptr<FSDirectory> db_dir;
Status status = env_->GetFileSystem()->NewDirectory(dbname_, IOOptions(),
&db_dir, nullptr);
if (status.ok()) {
status = vset_.LogAndApply(cfd, mut_cf_opts, read_options, &edit, &mutex_,
db_dir.get(), false /* new_descriptor_log */,
cf_opts);
}
mutex_.Unlock();
return status;
}
Status Close() {
Status s = Status::OK();
if (!closed_) {
if (db_lock_ != nullptr) {
s = env_->UnlockFile(db_lock_);
db_lock_ = nullptr;
}
closed_ = true;
}
return s;
}
~Repairer() { Close().PermitUncheckedError(); }
Status Run() {
Status status = env_->LockFile(LockFileName(dbname_), &db_lock_);
if (!status.ok()) {
return status;
}
status = FindFiles();
DBImpl* db_impl = nullptr;
if (status.ok()) {
// Discard older manifests and start a fresh one
for (size_t i = 0; i < manifests_.size(); i++) {
ArchiveFile(dbname_ + "/" + manifests_[i]);
}
// Just create a DBImpl temporarily so we can reuse NewDB()
db_impl = new DBImpl(db_options_, dbname_);
status = db_impl->NewDB(/*new_filenames=*/nullptr);
}
delete db_impl;
if (status.ok()) {
// Recover using the fresh manifest created by NewDB()
status =
vset_.Recover({{kDefaultColumnFamilyName, default_cf_opts_}}, false);
}
if (status.ok()) {
// Need to scan existing SST files first so the column families are
// created before we process WAL files
ExtractMetaData();
// ExtractMetaData() uses table_fds_ to know which SST files' metadata to
// extract -- we need to clear it here since metadata for existing SST
// files has been extracted already
table_fds_.clear();
ConvertLogFilesToTables();
ExtractMetaData();
status = AddTables();
}
if (status.ok()) {
uint64_t bytes = 0;
for (size_t i = 0; i < tables_.size(); i++) {
bytes += tables_[i].meta.fd.GetFileSize();
}
ROCKS_LOG_WARN(db_options_.info_log,
"**** Repaired rocksdb %s; "
"recovered %" ROCKSDB_PRIszt " files; %" PRIu64
" bytes. "
"Some data may have been lost. "
"****",
dbname_.c_str(), tables_.size(), bytes);
}
return status;
}
private:
struct TableInfo {
FileMetaData meta;
uint32_t column_family_id;
std::string column_family_name;
};
std::string const dbname_;
std::string db_session_id_;
Env* const env_;
const FileOptions file_options_;
const DBOptions db_options_;
const ImmutableDBOptions immutable_db_options_;
const InternalKeyComparator icmp_;
const ColumnFamilyOptions default_cf_opts_;
const ImmutableOptions default_iopts_; // table_cache_ holds reference
const ColumnFamilyOptions unknown_cf_opts_;
const bool create_unknown_cfs_;
std::shared_ptr<Cache> raw_table_cache_;
std::unique_ptr<TableCache> table_cache_;
WriteBufferManager wb_;
WriteController wc_;
VersionSet vset_;
std::unordered_map<std::string, ColumnFamilyOptions> cf_name_to_opts_;
InstrumentedMutex mutex_;
std::vector<std::string> manifests_;
std::vector<FileDescriptor> table_fds_;
std::vector<uint64_t> logs_;
std::vector<TableInfo> tables_;
uint64_t next_file_number_;
// Lock over the persistent DB state. Non-nullptr iff successfully
// acquired.
FileLock* db_lock_;
bool closed_;
Status FindFiles() {
std::vector<std::string> filenames;
bool found_file = false;
std::vector<std::string> to_search_paths;
for (size_t path_id = 0; path_id < db_options_.db_paths.size(); path_id++) {
to_search_paths.push_back(db_options_.db_paths[path_id].path);
}
// search wal_dir if user uses a customize wal_dir
bool same = immutable_db_options_.IsWalDirSameAsDBPath(dbname_);
if (!same) {
to_search_paths.push_back(immutable_db_options_.wal_dir);
}
for (size_t path_id = 0; path_id < to_search_paths.size(); path_id++) {
ROCKS_LOG_INFO(db_options_.info_log, "Searching path %s\n",
to_search_paths[path_id].c_str());
Status status = env_->GetChildren(to_search_paths[path_id], &filenames);
if (!status.ok()) {
return status;
}
if (!filenames.empty()) {
found_file = true;
}
uint64_t number;
FileType type;
for (size_t i = 0; i < filenames.size(); i++) {
if (ParseFileName(filenames[i], &number, &type)) {
if (type == kDescriptorFile) {
manifests_.push_back(filenames[i]);
} else {
if (number + 1 > next_file_number_) {
next_file_number_ = number + 1;
}
if (type == kWalFile) {
logs_.push_back(number);
} else if (type == kTableFile) {
table_fds_.emplace_back(number, static_cast<uint32_t>(path_id),
0);
} else {
// Ignore other files
}
}
}
}
}
if (!found_file) {
return Status::Corruption(dbname_, "repair found no files");
}
return Status::OK();
}
void ConvertLogFilesToTables() {
const auto& wal_dir = immutable_db_options_.GetWalDir();
for (size_t i = 0; i < logs_.size(); i++) {
// we should use LogFileName(wal_dir, logs_[i]) here. user might uses
// wal_dir option.
std::string logname = LogFileName(wal_dir, logs_[i]);
Status status = ConvertLogToTable(wal_dir, logs_[i]);
if (!status.ok()) {
ROCKS_LOG_WARN(db_options_.info_log,
"Log #%" PRIu64 ": ignoring conversion error: %s",
logs_[i], status.ToString().c_str());
}
ArchiveFile(logname);
}
}
Status ConvertLogToTable(const std::string& wal_dir, uint64_t log) {
struct LogReporter : public log::Reader::Reporter {
Env* env;
std::shared_ptr<Logger> info_log;
uint64_t lognum;
void Corruption(size_t bytes, const Status& s) override {
// We print error messages for corruption, but continue repairing.
ROCKS_LOG_ERROR(info_log, "Log #%" PRIu64 ": dropping %d bytes; %s",
lognum, static_cast<int>(bytes), s.ToString().c_str());
}
};
// TODO: plumb Env::IOActivity
const ReadOptions read_options;
// Open the log file
std::string logname = LogFileName(wal_dir, log);
const auto& fs = env_->GetFileSystem();
std::unique_ptr<SequentialFileReader> lfile_reader;
Status status = SequentialFileReader::Create(
fs, logname, fs->OptimizeForLogRead(file_options_), &lfile_reader,
nullptr /* dbg */, nullptr /* rate limiter */);
if (!status.ok()) {
return status;
}
// Create the log reader.
LogReporter reporter;
reporter.env = env_;
reporter.info_log = db_options_.info_log;
reporter.lognum = log;
// We intentionally make log::Reader do checksumming so that
// corruptions cause entire commits to be skipped instead of
// propagating bad information (like overly large sequence
// numbers).
log::Reader reader(db_options_.info_log, std::move(lfile_reader), &reporter,
true /*enable checksum*/, log);
// Initialize per-column family memtables
for (auto* cfd : *vset_.GetColumnFamilySet()) {
cfd->CreateNewMemtable(*cfd->GetLatestMutableCFOptions(),
kMaxSequenceNumber);
}
auto cf_mems = new ColumnFamilyMemTablesImpl(vset_.GetColumnFamilySet());
// Read all the records and add to a memtable
std::string scratch;
Slice record;
WriteBatch batch;
int counter = 0;
while (reader.ReadRecord(&record, &scratch)) {
if (record.size() < WriteBatchInternal::kHeader) {
reporter.Corruption(record.size(),
Status::Corruption("log record too small"));
continue;
}
Status record_status = WriteBatchInternal::SetContents(&batch, record);
if (record_status.ok()) {
record_status =
WriteBatchInternal::InsertInto(&batch, cf_mems, nullptr, nullptr);
}
if (record_status.ok()) {
counter += WriteBatchInternal::Count(&batch);
} else {
ROCKS_LOG_WARN(db_options_.info_log, "Log #%" PRIu64 ": ignoring %s",
log, record_status.ToString().c_str());
}
}
// Dump a table for each column family with entries in this log file.
for (auto* cfd : *vset_.GetColumnFamilySet()) {
// Do not record a version edit for this conversion to a Table
// since ExtractMetaData() will also generate edits.
MemTable* mem = cfd->mem();
if (mem->IsEmpty()) {
continue;
}
FileMetaData meta;
meta.fd = FileDescriptor(next_file_number_++, 0, 0);
// TODO: plumb Env::IOActivity
ReadOptions ro;
ro.total_order_seek = true;
Arena arena;
ScopedArenaIterator iter(mem->NewIterator(ro, &arena));
int64_t _current_time = 0;
immutable_db_options_.clock->GetCurrentTime(&_current_time)
.PermitUncheckedError(); // ignore error
const uint64_t current_time = static_cast<uint64_t>(_current_time);
meta.file_creation_time = current_time;
SnapshotChecker* snapshot_checker = DisableGCSnapshotChecker::Instance();
auto write_hint = cfd->CalculateSSTWriteHint(0);
std::vector<std::unique_ptr<FragmentedRangeTombstoneIterator>>
range_del_iters;
auto range_del_iter = mem->NewRangeTombstoneIterator(
ro, kMaxSequenceNumber, false /* immutable_memtable */);
if (range_del_iter != nullptr) {
range_del_iters.emplace_back(range_del_iter);
}
IOStatus io_s;
CompressionOptions default_compression;
TableBuilderOptions tboptions(
*cfd->ioptions(), *cfd->GetLatestMutableCFOptions(),
cfd->internal_comparator(), cfd->int_tbl_prop_collector_factories(),
kNoCompression, default_compression, cfd->GetID(), cfd->GetName(),
-1 /* level */, false /* is_bottommost */,
TableFileCreationReason::kRecovery, 0 /* oldest_key_time */,
0 /* file_creation_time */, "DB Repairer" /* db_id */, db_session_id_,
0 /*target_file_size*/, meta.fd.GetNumber());
SeqnoToTimeMapping empty_seqno_time_mapping;
status = BuildTable(
dbname_, /* versions */ nullptr, immutable_db_options_, tboptions,
file_options_, read_options, table_cache_.get(), iter.get(),
std::move(range_del_iters), &meta, nullptr /* blob_file_additions */,
{}, kMaxSequenceNumber, kMaxSequenceNumber, snapshot_checker,
false /* paranoid_file_checks*/, nullptr /* internal_stats */, &io_s,
nullptr /*IOTracer*/, BlobFileCreationReason::kRecovery,
empty_seqno_time_mapping, nullptr /* event_logger */, 0 /* job_id */,
Env::IO_HIGH, nullptr /* table_properties */, write_hint);
ROCKS_LOG_INFO(db_options_.info_log,
"Log #%" PRIu64 ": %d ops saved to Table #%" PRIu64 " %s",
log, counter, meta.fd.GetNumber(),
status.ToString().c_str());
if (status.ok()) {
if (meta.fd.GetFileSize() > 0) {
table_fds_.push_back(meta.fd);
}
} else {
break;
}
}
delete cf_mems;
return status;
}
void ExtractMetaData() {
for (size_t i = 0; i < table_fds_.size(); i++) {
TableInfo t;
t.meta.fd = table_fds_[i];
Status status = ScanTable(&t);
if (!status.ok()) {
std::string fname = TableFileName(
db_options_.db_paths, t.meta.fd.GetNumber(), t.meta.fd.GetPathId());
char file_num_buf[kFormatFileNumberBufSize];
FormatFileNumber(t.meta.fd.GetNumber(), t.meta.fd.GetPathId(),
file_num_buf, sizeof(file_num_buf));
ROCKS_LOG_WARN(db_options_.info_log, "Table #%s: ignoring %s",
file_num_buf, status.ToString().c_str());
ArchiveFile(fname);
} else {
tables_.push_back(t);
}
}
}
Status ScanTable(TableInfo* t) {
std::string fname = TableFileName(
db_options_.db_paths, t->meta.fd.GetNumber(), t->meta.fd.GetPathId());
int counter = 0;
uint64_t file_size;
Status status = env_->GetFileSize(fname, &file_size);
t->meta.fd = FileDescriptor(t->meta.fd.GetNumber(), t->meta.fd.GetPathId(),
file_size);
std::shared_ptr<const TableProperties> props;
if (status.ok()) {
// TODO: plumb Env::IOActivity
const ReadOptions read_options;
status = table_cache_->GetTableProperties(file_options_, read_options,
icmp_, t->meta, &props);
}
if (status.ok()) {
auto s =
GetSstInternalUniqueId(props->db_id, props->db_session_id,
props->orig_file_number, &t->meta.unique_id);
if (!s.ok()) {
ROCKS_LOG_WARN(db_options_.info_log,
"Table #%" PRIu64
": unable to get unique id, default to Unknown.",
t->meta.fd.GetNumber());
}
t->column_family_id = static_cast<uint32_t>(props->column_family_id);
if (t->column_family_id ==
TablePropertiesCollectorFactory::Context::kUnknownColumnFamily) {
ROCKS_LOG_WARN(
db_options_.info_log,
"Table #%" PRIu64
": column family unknown (probably due to legacy format); "
"adding to default column family id 0.",
t->meta.fd.GetNumber());
t->column_family_id = 0;
}
if (vset_.GetColumnFamilySet()->GetColumnFamily(t->column_family_id) ==
nullptr) {
status =
AddColumnFamily(props->column_family_name, t->column_family_id);
}
t->meta.oldest_ancester_time = props->creation_time;
}
ColumnFamilyData* cfd = nullptr;
if (status.ok()) {
cfd = vset_.GetColumnFamilySet()->GetColumnFamily(t->column_family_id);
if (cfd->GetName() != props->column_family_name) {
ROCKS_LOG_ERROR(
db_options_.info_log,
"Table #%" PRIu64
": inconsistent column family name '%s'; expected '%s' for column "
"family id %" PRIu32 ".",
t->meta.fd.GetNumber(), props->column_family_name.c_str(),
cfd->GetName().c_str(), t->column_family_id);
status = Status::Corruption(dbname_, "inconsistent column family name");
}
}
if (status.ok()) {
// TODO: plumb Env::IOActivity
ReadOptions ropts;
ropts.total_order_seek = true;
InternalIterator* iter = table_cache_->NewIterator(
ropts, file_options_, cfd->internal_comparator(), t->meta,
nullptr /* range_del_agg */,
cfd->GetLatestMutableCFOptions()->prefix_extractor,
/*table_reader_ptr=*/nullptr, /*file_read_hist=*/nullptr,
TableReaderCaller::kRepair, /*arena=*/nullptr, /*skip_filters=*/false,
/*level=*/-1, /*max_file_size_for_l0_meta_pin=*/0,
/*smallest_compaction_key=*/nullptr,
/*largest_compaction_key=*/nullptr,
/*allow_unprepared_value=*/false);
ParsedInternalKey parsed;
for (iter->SeekToFirst(); iter->Valid(); iter->Next()) {
Slice key = iter->key();
Status pik_status =
ParseInternalKey(key, &parsed, db_options_.allow_data_in_errors);
if (!pik_status.ok()) {
ROCKS_LOG_ERROR(db_options_.info_log,
"Table #%" PRIu64 ": unparsable key - %s",
t->meta.fd.GetNumber(), pik_status.getState());
continue;
}
counter++;
status = t->meta.UpdateBoundaries(key, iter->value(), parsed.sequence,
parsed.type);
if (!status.ok()) {
break;
}
}
if (status.ok() && !iter->status().ok()) {
status = iter->status();
}
delete iter;
ROCKS_LOG_INFO(db_options_.info_log, "Table #%" PRIu64 ": %d entries %s",
t->meta.fd.GetNumber(), counter,
status.ToString().c_str());
}
if (status.ok()) {
// XXX/FIXME: This is just basic, naive handling of range tombstones,
// like call to UpdateBoundariesForRange in builder.cc where we assume
// an SST file is a full sorted run. This probably needs the extra logic
// from compaction_job.cc around call to UpdateBoundariesForRange (to
// handle range tombstones extendingg beyond range of other entries).
// TODO: plumb Env::IOActivity
ReadOptions ropts;
std::unique_ptr<FragmentedRangeTombstoneIterator> r_iter;
status = table_cache_->GetRangeTombstoneIterator(
ropts, cfd->internal_comparator(), t->meta, &r_iter);
if (r_iter) {
r_iter->SeekToFirst();
while (r_iter->Valid()) {
auto tombstone = r_iter->Tombstone();
auto kv = tombstone.Serialize();
t->meta.UpdateBoundariesForRange(
kv.first, tombstone.SerializeEndKey(), tombstone.seq_,
cfd->internal_comparator());
r_iter->Next();
}
}
}
return status;
}
Status AddTables() {
// TODO: plumb Env::IOActivity;
const ReadOptions read_options;
std::unordered_map<uint32_t, std::vector<const TableInfo*>> cf_id_to_tables;
SequenceNumber max_sequence = 0;
for (size_t i = 0; i < tables_.size(); i++) {
cf_id_to_tables[tables_[i].column_family_id].push_back(&tables_[i]);
if (max_sequence < tables_[i].meta.fd.largest_seqno) {
max_sequence = tables_[i].meta.fd.largest_seqno;
}
}
vset_.SetLastAllocatedSequence(max_sequence);
vset_.SetLastPublishedSequence(max_sequence);
vset_.SetLastSequence(max_sequence);
for (const auto& cf_id_and_tables : cf_id_to_tables) {
auto* cfd =
vset_.GetColumnFamilySet()->GetColumnFamily(cf_id_and_tables.first);
// Recover files' epoch number using dummy VersionStorageInfo
VersionBuilder dummy_version_builder(
cfd->current()->version_set()->file_options(), cfd->ioptions(),
cfd->table_cache(), cfd->current()->storage_info(),
cfd->current()->version_set(),
cfd->GetFileMetadataCacheReservationManager());
VersionStorageInfo dummy_vstorage(
&cfd->internal_comparator(), cfd->user_comparator(),
cfd->NumberLevels(), cfd->ioptions()->compaction_style,
nullptr /* src_vstorage */, cfd->ioptions()->force_consistency_checks,
EpochNumberRequirement::kMightMissing);
Status s;
VersionEdit dummy_edit;
for (const auto* table : cf_id_and_tables.second) {
// TODO(opt): separate out into multiple levels
dummy_edit.AddFile(
0, table->meta.fd.GetNumber(), table->meta.fd.GetPathId(),
table->meta.fd.GetFileSize(), table->meta.smallest,
table->meta.largest, table->meta.fd.smallest_seqno,
table->meta.fd.largest_seqno, table->meta.marked_for_compaction,
table->meta.temperature, table->meta.oldest_blob_file_number,
table->meta.oldest_ancester_time, table->meta.file_creation_time,
table->meta.epoch_number, table->meta.file_checksum,
table->meta.file_checksum_func_name, table->meta.unique_id,
table->meta.compensated_range_deletion_size);
}
s = dummy_version_builder.Apply(&dummy_edit);
if (s.ok()) {
s = dummy_version_builder.SaveTo(&dummy_vstorage);
}
if (s.ok()) {
dummy_vstorage.RecoverEpochNumbers(cfd);
}
if (s.ok()) {
// Record changes from this repair in VersionEdit, including files with
// recovered epoch numbers
VersionEdit edit;
edit.SetComparatorName(cfd->user_comparator()->Name());
edit.SetLogNumber(0);
edit.SetNextFile(next_file_number_);
edit.SetColumnFamily(cfd->GetID());
for (int level = 0; level < dummy_vstorage.num_levels(); ++level) {
for (FileMetaData* file_meta : dummy_vstorage.LevelFiles(level)) {
edit.AddFile(level, *file_meta);
}
}
// Release resources occupied by the dummy VersionStorageInfo
for (int level = 0; level < dummy_vstorage.num_levels(); ++level) {
for (FileMetaData* file_meta : dummy_vstorage.LevelFiles(level)) {
file_meta->refs--;
if (file_meta->refs <= 0) {
delete file_meta;
}
}
}
// Persist record of changes
assert(next_file_number_ > 0);
vset_.MarkFileNumberUsed(next_file_number_ - 1);
mutex_.Lock();
std::unique_ptr<FSDirectory> db_dir;
s = env_->GetFileSystem()->NewDirectory(dbname_, IOOptions(), &db_dir,
nullptr);
if (s.ok()) {
s = vset_.LogAndApply(cfd, *cfd->GetLatestMutableCFOptions(),
read_options, &edit, &mutex_, db_dir.get(),
false /* new_descriptor_log */);
}
mutex_.Unlock();
}
if (!s.ok()) {
return s;
}
}
return Status::OK();
}
void ArchiveFile(const std::string& fname) {
// Move into another directory. E.g., for
// dir/foo
// rename to
// dir/lost/foo
const char* slash = strrchr(fname.c_str(), '/');
std::string new_dir;
if (slash != nullptr) {
new_dir.assign(fname.data(), slash - fname.data());
}
new_dir.append("/lost");
env_->CreateDir(new_dir).PermitUncheckedError(); // Ignore error
std::string new_file = new_dir;
new_file.append("/");
new_file.append((slash == nullptr) ? fname.c_str() : slash + 1);
Status s = env_->RenameFile(fname, new_file);
ROCKS_LOG_INFO(db_options_.info_log, "Archiving %s: %s\n", fname.c_str(),
s.ToString().c_str());
}
};
Status GetDefaultCFOptions(
const std::vector<ColumnFamilyDescriptor>& column_families,
ColumnFamilyOptions* res) {
assert(res != nullptr);
auto iter = std::find_if(column_families.begin(), column_families.end(),
[](const ColumnFamilyDescriptor& cfd) {
return cfd.name == kDefaultColumnFamilyName;
});
if (iter == column_families.end()) {
return Status::InvalidArgument(
"column_families", "Must contain entry for default column family");
}
*res = iter->options;
return Status::OK();
}
} // anonymous namespace
Status RepairDB(const std::string& dbname, const DBOptions& db_options,
const std::vector<ColumnFamilyDescriptor>& column_families) {
ColumnFamilyOptions default_cf_opts;
Status status = GetDefaultCFOptions(column_families, &default_cf_opts);
if (!status.ok()) {
return status;
}
Repairer repairer(dbname, db_options, column_families, default_cf_opts,
ColumnFamilyOptions() /* unknown_cf_opts */,
false /* create_unknown_cfs */);
status = repairer.Run();
if (status.ok()) {
status = repairer.Close();
}
return status;
}
Status RepairDB(const std::string& dbname, const DBOptions& db_options,
const std::vector<ColumnFamilyDescriptor>& column_families,
const ColumnFamilyOptions& unknown_cf_opts) {
ColumnFamilyOptions default_cf_opts;
Status status = GetDefaultCFOptions(column_families, &default_cf_opts);
if (!status.ok()) {
return status;
}
Repairer repairer(dbname, db_options, column_families, default_cf_opts,
unknown_cf_opts, true /* create_unknown_cfs */);
status = repairer.Run();
if (status.ok()) {
status = repairer.Close();
}
return status;
}
Status RepairDB(const std::string& dbname, const Options& options) {
Options opts(options);
DBOptions db_options(opts);
ColumnFamilyOptions cf_options(opts);
Repairer repairer(dbname, db_options, {}, cf_options /* default_cf_opts */,
cf_options /* unknown_cf_opts */,
true /* create_unknown_cfs */);
Status status = repairer.Run();
if (status.ok()) {
status = repairer.Close();
}
return status;
}
} // namespace ROCKSDB_NAMESPACE