Commit graph

199 commits

Author SHA1 Message Date
Yi Wu 5f5fddabc7 port folly::JemallocNodumpAllocator (#4534)
Summary:
Introduce `JemallocNodumpAllocator`, which allow exclusion of block cache usage from core dump. It utilize custom hook of jemalloc arena, and when jemalloc arena request memory from system, the allocator use the hook to set `MADV_DONTDUMP ` to the memory. The implementation is basically the same as `folly::JemallocNodumpAllocator`, except for some minor difference:
1. It only support jemalloc >= 5.0
2. When the allocator destruct, it explicitly destruct the corresponding arena via `arena.<i>.destroy` via `mallctl`.

Depending on #4502.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4534

Differential Revision: D10435474

Pulled By: yiwu-arbug

fbshipit-source-id: e80edea755d3853182485d2be710376384ce0bb4
2018-10-26 17:29:18 -07:00
Abhishek Madan 8c78348c77 Use only "local" range tombstones during Get (#4449)
Summary:
Previously, range tombstones were accumulated from every level, which
was necessary if a range tombstone in a higher level covered a key in a lower
level. However, RangeDelAggregator::AddTombstones's complexity is based on
the number of tombstones that are currently stored in it, which is wasteful in
the Get case, where we only need to know the highest sequence number of range
tombstones that cover the key from higher levels, and compute the highest covering
sequence number at the current level. This change introduces this optimization, and
removes the use of RangeDelAggregator from the Get path.

In the benchmark results, the following command was used to initialize the database:
```
./db_bench -db=/dev/shm/5k-rts -use_existing_db=false -benchmarks=filluniquerandom -write_buffer_size=1048576 -compression_type=lz4 -target_file_size_base=1048576 -max_bytes_for_level_base=4194304 -value_size=112 -key_size=16 -block_size=4096 -level_compaction_dynamic_level_bytes=true -num=5000000 -max_background_jobs=12 -benchmark_write_rate_limit=20971520 -range_tombstone_width=100 -writes_per_range_tombstone=100 -max_num_range_tombstones=50000 -bloom_bits=8
```

...and the following command was used to measure read throughput:
```
./db_bench -db=/dev/shm/5k-rts/ -use_existing_db=true -benchmarks=readrandom -disable_auto_compactions=true -num=5000000 -reads=100000 -threads=32
```

The filluniquerandom command was only run once, and the resulting database was used
to measure read performance before and after the PR. Both binaries were compiled with
`DEBUG_LEVEL=0`.

Readrandom results before PR:
```
readrandom   :       4.544 micros/op 220090 ops/sec;   16.9 MB/s (63103 of 100000 found)
```

Readrandom results after PR:
```
readrandom   :      11.147 micros/op 89707 ops/sec;    6.9 MB/s (63103 of 100000 found)
```

So it's actually slower right now, but this PR paves the way for future optimizations (see #4493).

----
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4449

Differential Revision: D10370575

Pulled By: abhimadan

fbshipit-source-id: 9a2e152be1ef36969055c0e9eb4beb0d96c11f4d
2018-10-24 12:31:12 -07:00
Jigar Bhati a4d9aa6b18 Plumb WriteBufferManager through JNI (#4492)
Summary:
Allow rocks java to explicitly create WriteBufferManager by plumbing it to the native code through JNI.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4492

Differential Revision: D10428506

Pulled By: sagar0

fbshipit-source-id: cd9dd8c2ef745a0303416b44e2080547bdcca1fd
2018-10-17 11:49:57 -07:00
Ben Clay c9048021ad RocksJava: memory_util support (#4446)
Summary:
JNI passthrough for utilities/memory/memory_util.cc

sagar0 adamretter
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4446

Differential Revision: D10174578

Pulled By: sagar0

fbshipit-source-id: d1d196d771dff22afb7ef7500f308233675696f8
2018-10-08 11:05:27 -07:00
Yi Wu d6f2ecf49c Utility to run task periodically in a thread (#4423)
Summary:
Introduce `RepeatableThread` utility to run task periodically in a separate thread. It is basically the same as the the same class in fbcode, and in addition provide a helper method to let tests mock time and trigger execution one at a time.

We can use this class to replace `TimerQueue` in #4382 and `BlobDB`.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4423

Differential Revision: D10020932

Pulled By: yiwu-arbug

fbshipit-source-id: 3616bef108c39a33c92eedb1256de424b7c04087
2018-09-27 15:28:00 -07:00
Abhishek Madan 1626f6ab6b Add RangeDelAggregator microbenchmarks (#4363)
Summary:
To measure the results of upcoming DeleteRange v2 work, this commit adds
simple benchmarks for RangeDelAggregator. It measures the average time
for AddTombstones and ShouldDelete calls.

Using this to compare the results before #4014 and on the latest master (using the default arguments) produces the following results:

Before #4014:
```
=======================
Results:
=======================
AddTombstones:          1356.28 us
ShouldDelete:           0.401732 us
```

Latest master:
```
=======================
Results:
=======================
AddTombstones:          740.82 us
ShouldDelete:           0.383271 us
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4363

Differential Revision: D9881676

Pulled By: abhimadan

fbshipit-source-id: 793e7d61aa4b9d47eb917bbcc03f08695b5e5442
2018-09-17 14:58:31 -07:00
Sagar Vemuri f46dd5cbeb Remove trace_analyzer_tool from LIB_SOURCES (#4331)
Summary:
trace_analyzer_tool should only be in ANALYZER_LIB_SOURCES and not in LIB_SOURCES.
This fixes java_test travis build failures seen in jtest.
Blame: a6d3de4e7a
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4331

Differential Revision: D9560377

Pulled By: sagar0

fbshipit-source-id: 6b9636201a920b56ee0f61e367fee5d3dca692b0
2018-08-29 21:28:40 -07:00
Yi Wu a6d3de4e7a BlobDB: Implement DisableFileDeletions (#4314)
Summary:
`DB::DiableFileDeletions` and `DB::EnableFileDeletions` are used for applications to stop RocksDB background jobs to delete files while they are doing replication. Implement these methods for BlobDB. `DeleteObsolteFiles` now needs to check `disable_file_deletions_` before starting, and will hold `delete_file_mutex_` the whole time while it is running. `DisableFileDeletions` needs to wait on `delete_file_mutex_` for running `DeleteObsolteFiles` job and set `disable_file_deletions_` flag.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4314

Differential Revision: D9501373

Pulled By: yiwu-arbug

fbshipit-source-id: 81064c1228f1724eff46da22b50ff765b16292cd
2018-08-27 10:58:29 -07:00
Zhichao Cao 9e2d5ab6bf Adjusted the Makefile of trace_analyzer to isolate the Gflags from other (#4290)
Summary:
Previously, the trace_analyzer_tool will be complied with other libobjects, which let the GFLAGS of trace_analyzer appear in other tools (e.g., db_bench, rocksdb_dump, and etc.). When using '--help', the help information of trace_analyzer will appear in other tool help information, which will cause confusion issues.

Currently, trace_analyzer_tool is built and used only by trace_analyzer and trace_analyzer_test to avoid the issues.

Tested with make asan_check.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4290

Differential Revision: D9413163

Pulled By: zhichao-cao

fbshipit-source-id: ed5d20c4575a53ca15ff62a2ffe601d5cf278cc4
2018-08-21 10:47:24 -07:00
Christian Esken c7cf981a85 Add CompactRangeOptions for Java (#4220)
Summary:
Closes https://github.com/facebook/rocksdb/issues/4195

CompactRangeOptions are available the CPP API, but not in the Java API. This PR adds CompactRangeOptions to the Java API and adds an overloaded compactRange() method. See https://github.com/facebook/rocksdb/issues/4195 for the original discussion.

This change supports all fields of CompactRangeOptions, including the required enum converters in the JNI portal.

Significant changes:
- Make CompactRangeOptions available in the compactRange() for Java.
- Deprecate other compactRange() methods that have individual option params, like in the CPP code.
- Migrate rocksdb_compactrange_helper() to  CompactRangeOptions.
- Add Java unit tests for CompactRangeOptions.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4220

Differential Revision: D9380007

Pulled By: sagar0

fbshipit-source-id: 6af6c334f221427f1997b33fb24c3986b092fed6
2018-08-17 10:57:25 -07:00
Fenggang Wu 19ec44fd39 Improve point-lookup performance using a data block hash index (#4174)
Summary:
Add hash index support to data blocks, which helps to reduce the CPU utilization of point-lookup operations. This feature is backward compatible with the data block created without the hash index. It is disabled by default unless `BlockBasedTableOptions::data_block_index_type` is set to `data_block_index_type = kDataBlockBinaryAndHash.`

The DB size would be bigger with the hash index option as a hash table is added at the end of each data block. If the hash utilization ratio is 1:1, the space overhead is one byte per key. The hash table utilization ratio is adjustable using `BlockBasedTableOptions::data_block_hash_table_util_ratio`. A lower utilization ratio will improve more on the point-lookup efficiency, but take more space too.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4174

Differential Revision: D8965914

Pulled By: fgwu

fbshipit-source-id: 1c6bae5d1fc39c80282d8890a72e9e67bc247198
2018-08-15 14:30:03 -07:00
Zhichao Cao 999d955e4f RocksDB Trace Analyzer (#4091)
Summary:
A framework of trace analyzing for RocksDB

After collecting the trace by using the tool of [PR #3837](https://github.com/facebook/rocksdb/pull/3837). User can use the Trace Analyzer to interpret, analyze, and characterize the collected workload.
**Input:**
1. trace file
2. Whole keys space file

**Statistics:**
1. Access count of each operation (Get, Put, Delete, SingleDelete, DeleteRange, Merge) in each column family.
2. Key hotness (access count) of each one
3. Key space separation based on given prefix
4. Key size distribution
5. Value size distribution if appliable
6. Top K accessed keys
7. QPS statistics including the average QPS and peak QPS
8. Top K accessed prefix
9. The query correlation analyzing, output the number of X after Y and the corresponding average time
    intervals

**Output:**
1. key access heat map (either in the accessed key space or whole key space)
2. trace sequence file (interpret the raw trace file to line base text file for future use)
3. Time serial (The key space ID and its access time)
4. Key access count distritbution
5. Key size distribution
6. Value size distribution (in each intervals)
7. whole key space separation by the prefix
8. Accessed key space separation by the prefix
9. QPS of each operation and each column family
10. Top K QPS and their accessed prefix range

**Test:**
1. Added the unit test of analyzing Get, Put, Delete, SingleDelete, DeleteRange, Merge
2. Generated the trace and analyze the trace

**Implemented but not tested (due to the limitation of trace_replay):**
1. Analyzing Iterator, supporting Seek() and SeekForPrev() analyzing
2. Analyzing the number of Key found by Get

**Future Work:**
1.  Support execution time analyzing of each requests
2.  Support cache hit situation and block read situation of Get
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4091

Differential Revision: D9256157

Pulled By: zhichao-cao

fbshipit-source-id: f0ceacb7eedbc43a3eee6e85b76087d7832a8fe6
2018-08-13 11:44:02 -07:00
Yi Wu 140f256da2 BlobDB: Cleanup TTLExtractor interface (#4229)
Summary:
Cleanup TTLExtractor interface. The original purpose of it is to allow our users keep using existing `Write()` interface but allow it to accept TTL via `TTLExtractor`. However the interface is confusing. Will replace it with something like `WriteWithTTL(batch, ttl)` in the future.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4229

Differential Revision: D9174390

Pulled By: yiwu-arbug

fbshipit-source-id: 68201703d784408b851336ab4dd9b84188245b2d
2018-08-06 11:58:05 -07:00
Sagar Vemuri 12b6cdeed3 Trace and Replay for RocksDB (#3837)
Summary:
A framework for tracing and replaying RocksDB operations.

A binary trace file is created by capturing the DB operations, and it can be replayed back at the same rate using db_bench.

- Column-families are supported
- Multi-threaded tracing is supported.
- TraceReader and TraceWriter are exposed to the user, so that tracing to various destinations can be enabled (say, to other messaging/logging services). By default, a FileTraceReader and FileTraceWriter are implemented to capture to a file and replay from it.
- This is not yet ideal to be enabled in production due to large performance overhead, but it can be safely tried out in a shadow setup, say, for analyzing RocksDB operations.

Currently supported DB operations:
- Writes:
-- Put
-- Merge
-- Delete
-- SingleDelete
-- DeleteRange
-- Write
- Reads:
-- Get (point lookups)
Pull Request resolved: https://github.com/facebook/rocksdb/pull/3837

Differential Revision: D7974837

Pulled By: sagar0

fbshipit-source-id: 8ec65aaf336504bc1f6ed0feae67f6ed5ef97a72
2018-08-01 00:27:08 -07:00
Fenggang Wu 8805ec2f49 DataBlockHashIndex: Standalone Implementation with Unit Test (#4139)
Summary:
The first step of the `DataBlockHashIndex` implementation. A string based hash table is implemented and unit-tested.

`DataBlockHashIndexBuilder`: `Add()` takes pairs of `<key, restart_index>`, and formats it into a string when `Finish()` is called.
`DataBlockHashIndex`: initialized by the formatted string, and can interpret it as a hash table. Lookup for a key is supported by iterator operation.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4139

Reviewed By: sagar0

Differential Revision: D8866764

Pulled By: fgwu

fbshipit-source-id: 7f015f0098632c65979a22898a50424384730b10
2018-07-24 11:43:37 -07:00
Chang Su 374c37da5b move static msgs out of Status class (#4144)
Summary:
The member msgs of class Status contains all types of status messages.
When users dump a Status object, msgs will confuse users. So move it out
of class Status by making it as file-local static variable.

Closes #3831 .
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4144

Differential Revision: D8941419

Pulled By: sagar0

fbshipit-source-id: 56b0510258465ff26db15aa6b04e01532e053e3d
2018-07-23 15:44:16 -07:00
Siying Dong ddc07b40fc Remove managed iterator
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/4124

Differential Revision: D8829910

Pulled By: siying

fbshipit-source-id: f3e952ccf3a631071a5d77c48e327046f8abb560
2018-07-17 14:43:18 -07:00
Anand Ananthabhotla 52d4c9b7f6 Allow DB resume after background errors (#3997)
Summary:
Currently, if RocksDB encounters errors during a write operation (user requested or BG operations), it sets DBImpl::bg_error_ and fails subsequent writes. This PR allows the DB to be resumed for certain classes of errors. It consists of 3 parts -
1. Introduce Status::Severity in rocksdb::Status to indicate whether a given error can be recovered from or not
2. Refactor the error handling code so that setting bg_error_ and deciding on severity is in one place
3. Provide an API for the user to clear the error and resume the DB instance

This whole change is broken up into multiple PRs. Initially, we only allow clearing the error for Status::NoSpace() errors during background flush/compaction. Subsequent PRs will expand this to include more errors and foreground operations such as Put(), and implement a polling mechanism for out-of-space errors.
Closes https://github.com/facebook/rocksdb/pull/3997

Differential Revision: D8653831

Pulled By: anand1976

fbshipit-source-id: 6dc835c76122443a7668497c0226b4f072bc6afd
2018-06-28 12:34:40 -07:00
Dmitri Smirnov f4b72d7056 Provide a way to override windows memory allocator with jemalloc for ZSTD
Summary:
Windows does not have LD_PRELOAD mechanism to override all memory allocation functions and ZSTD makes use of C-tuntime calloc. During flushes and compactions default system allocator fragments and the system slows down considerably.

For builds with jemalloc we employ an advanced ZSTD context creation API that re-directs memory allocation to jemalloc. To reduce the cost of context creation on each block we cache ZSTD context within the block based table builder while a new SST file is being built, this will help all platform builds including those w/o jemalloc. This avoids system allocator fragmentation and improves the performance.

The change does not address random reads and currently on Windows reads with ZSTD regress as compared with SNAPPY compression.
Closes https://github.com/facebook/rocksdb/pull/3838

Differential Revision: D8229794

Pulled By: miasantreble

fbshipit-source-id: 719b622ab7bf4109819bc44f45ec66f0dd3ee80d
2018-06-04 12:12:48 -07:00
Manuel Ung 01e3c30def Extend existing unit tests to run with WriteUnprepared as well
Summary:
As titled.

I have not extended the Compatibility tests because the new WAL markers are still unimplemented.
Closes https://github.com/facebook/rocksdb/pull/3941

Differential Revision: D8238394

Pulled By: lth

fbshipit-source-id: 980e3d44837bbf2cfa64047f9738f559dfac4b1d
2018-06-01 14:58:41 -07:00
Manuel Ung aaac6cd16f Add write unprepared classes by inheriting from write prepared
Summary: Closes https://github.com/facebook/rocksdb/pull/3907

Differential Revision: D8218325

Pulled By: lth

fbshipit-source-id: ff32d8dab4a159cd2762876cba4b15e3dc51ff3b
2018-05-31 10:47:42 -07:00
Andrew Kryczka e410501eeb Add missing test files to src.mk
Summary:
We only generate the header dependency (".cc.d") files for files mentioned in "src.mk". When we don't generate them, changes to header dependencies do not cause `make` to recompile the dependent ".o". Then it takes a while for developers (or maybe just me) to realize `make clean` is necessary.
Closes https://github.com/facebook/rocksdb/pull/3876

Differential Revision: D8065389

Pulled By: ajkr

fbshipit-source-id: 0f62eee7bcab15b0215791564e6ab3775d46996b
2018-05-21 09:43:29 -07:00
Mike Kolupaev 8bf555f487 Change and clarify the relationship between Valid(), status() and Seek*() for all iterators. Also fix some bugs
Summary:
Before this PR, Iterator/InternalIterator may simultaneously have non-ok status() and Valid() = true. That state means that the last operation failed, but the iterator is nevertheless positioned on some unspecified record. Likely intended uses of that are:
 * If some sst files are corrupted, a normal iterator can be used to read the data from files that are not corrupted.
 * When using read_tier = kBlockCacheTier, read the data that's in block cache, skipping over the data that is not.

However, this behavior wasn't documented well (and until recently the wiki on github had misleading incorrect information). In the code there's a lot of confusion about the relationship between status() and Valid(), and about whether Seek()/SeekToLast()/etc reset the status or not. There were a number of bugs caused by this confusion, both inside rocksdb and in the code that uses rocksdb (including ours).

This PR changes the convention to:
 * If status() is not ok, Valid() always returns false.
 * Any seek operation resets status. (Before the PR, it depended on iterator type and on particular error.)

This does sacrifice the two use cases listed above, but siying said it's ok.

Overview of the changes:
 * A commit that adds missing status checks in MergingIterator. This fixes a bug that actually affects us, and we need it fixed. `DBIteratorTest.NonBlockingIterationBugRepro` explains the scenario.
 * Changes to lots of iterator types to make all of them conform to the new convention. Some bug fixes along the way. By far the biggest changes are in DBIter, which is a big messy piece of code; I tried to make it less big and messy but mostly failed.
 * A stress-test for DBIter, to gain some confidence that I didn't break it. It does a few million random operations on the iterator, while occasionally modifying the underlying data (like ForwardIterator does) and occasionally returning non-ok status from internal iterator.

To find the iterator types that needed changes I searched for "public .*Iterator" in the code. Here's an overview of all 27 iterator types:

Iterators that didn't need changes:
 * status() is always ok(), or Valid() is always false: MemTableIterator, ModelIter, TestIterator, KVIter (2 classes with this name anonymous namespaces), LoggingForwardVectorIterator, VectorIterator, MockTableIterator, EmptyIterator, EmptyInternalIterator.
 * Thin wrappers that always pass through Valid() and status(): ArenaWrappedDBIter, TtlIterator, InternalIteratorFromIterator.

Iterators with changes (see inline comments for details):
 * DBIter - an overhaul:
    - It used to silently skip corrupted keys (`FindParseableKey()`), which seems dangerous. This PR makes it just stop immediately after encountering a corrupted key, just like it would for other kinds of corruption. Let me know if there was actually some deeper meaning in this behavior and I should put it back.
    - It had a few code paths silently discarding subiterator's status. The stress test caught a few.
    - The backwards iteration code path was expecting the internal iterator's set of keys to be immutable. It's probably always true in practice at the moment, since ForwardIterator doesn't support backwards iteration, but this PR fixes it anyway. See added DBIteratorTest.ReverseToForwardBug for an example.
    - Some parts of backwards iteration code path even did things like `assert(iter_->Valid())` after a seek, which is never a safe assumption.
    - It used to not reset status on seek for some types of errors.
    - Some simplifications and better comments.
    - Some things got more complicated from the added error handling. I'm open to ideas for how to make it nicer.
 * MergingIterator - check status after every operation on every subiterator, and in some places assert that valid subiterators have ok status.
 * ForwardIterator - changed to the new convention, also slightly simplified.
 * ForwardLevelIterator - fixed some bugs and simplified.
 * LevelIterator - simplified.
 * TwoLevelIterator - changed to the new convention. Also fixed a bug that would make SeekForPrev() sometimes silently ignore errors from first_level_iter_.
 * BlockBasedTableIterator - minor changes.
 * BlockIter - replaced `SetStatus()` with `Invalidate()` to make sure non-ok BlockIter is always invalid.
 * PlainTableIterator - some seeks used to not reset status.
 * CuckooTableIterator - tiny code cleanup.
 * ManagedIterator - fixed some bugs.
 * BaseDeltaIterator - changed to the new convention and fixed a bug.
 * BlobDBIterator - seeks used to not reset status.
 * KeyConvertingIterator - some small change.
Closes https://github.com/facebook/rocksdb/pull/3810

Differential Revision: D7888019

Pulled By: al13n321

fbshipit-source-id: 4aaf6d3421c545d16722a815b2fa2e7912bc851d
2018-05-17 02:56:56 -07:00
Siying Dong d59549298f Skip deleted WALs during recovery
Summary:
This patch record min log number to keep to the manifest while flushing SST files to ignore them and any WAL older than them during recovery. This is to avoid scenarios when we have a gap between the WAL files are fed to the recovery procedure. The gap could happen by for example out-of-order WAL deletion. Such gap could cause problems in 2PC recovery where the prepared and commit entry are placed into two separate WAL and gap in the WALs could result into not processing the WAL with the commit entry and hence breaking the 2PC recovery logic.

Before the commit, for 2PC case, we determined which log number to keep in FindObsoleteFiles(). We looked at the earliest logs with outstanding prepare entries, or prepare entries whose respective commit or abort are in memtable. With the commit, the same calculation is done while we apply the SST flush. Just before installing the flush file, we precompute the earliest log file to keep after the flush finishes using the same logic (but skipping the memtables just flushed), record this information to the manifest entry for this new flushed SST file. This pre-computed value is also remembered in memory, and will later be used to determine whether a log file can be deleted. This value is unlikely to change until next flush because the commit entry will stay in memtable. (In WritePrepared, we could have removed the older log files as soon as all prepared entries are committed. It's not yet done anyway. Even if we do it, the only thing we loss with this new approach is earlier log deletion between two flushes, which does not guarantee to happen anyway because the obsolete file clean-up function is only executed after flush or compaction)

This min log number to keep is stored in the manifest using the safely-ignore customized field of AddFile entry, in order to guarantee that the DB generated using newer release can be opened by previous releases no older than 4.2.
Closes https://github.com/facebook/rocksdb/pull/3765

Differential Revision: D7747618

Pulled By: siying

fbshipit-source-id: d00c92105b4f83852e9754a1b70d6b64cb590729
2018-05-03 15:43:09 -07:00
Adam Retter ca87aef82d Added support for SstFileManager to RocksJava
Summary: Closes https://github.com/facebook/rocksdb/pull/3666

Differential Revision: D7457634

Pulled By: sagar0

fbshipit-source-id: 47741e2ee66e9255c580f4e38cfb86b284c27c2f
2018-04-06 21:26:32 -07:00
Yanqin Jin 1f5def1653 Fix race condition causing double deletion of ssts
Summary:
Possible interleaved execution of background compaction thread calling `FindObsoleteFiles (no full scan) / PurgeObsoleteFiles` and user thread calling `FindObsoleteFiles (full scan) / PurgeObsoleteFiles` can lead to race condition on which RocksDB attempts to delete a file twice. The second attempt will fail and return `IO error`. This may occur to other files,  but this PR targets sst.
Also add a unit test to verify that this PR fixes the issue.

The newly added unit test `obsolete_files_test` has a test case for this scenario, implemented in `ObsoleteFilesTest#RaceForObsoleteFileDeletion`. `TestSyncPoint`s are used to coordinate the interleaving the `user_thread` and background compaction thread. They execute as follows
```
timeline              user_thread                background_compaction thread
t1   |                                          FindObsoleteFiles(full_scan=false)
t2   |     FindObsoleteFiles(full_scan=true)
t3   |                                          PurgeObsoleteFiles
t4   |     PurgeObsoleteFiles
     V
```
When `user_thread` invokes `FindObsoleteFiles` with full scan, it collects ALL files in RocksDB directory, including the ones that background compaction thread have collected in its job context. Then `user_thread` will see an IO error when trying to delete these files in `PurgeObsoleteFiles` because background compaction thread has already deleted the file in `PurgeObsoleteFiles`.
To fix this, we make RocksDB remember which (SST) files have been found by threads after calling `FindObsoleteFiles` (see `DBImpl#files_grabbed_for_purge_`). Therefore, when another thread calls `FindObsoleteFiles` with full scan, it will not collect such files.

ajkr could you take a look and comment? Thanks!
Closes https://github.com/facebook/rocksdb/pull/3638

Differential Revision: D7384372

Pulled By: riversand963

fbshipit-source-id: 01489516d60012e722ee65a80e1449e589ce26d3
2018-03-28 10:29:59 -07:00
Dmitri Smirnov 53d66df0c4 Refactor sync_point to make implementation either customizable or replaceable
Summary: Closes https://github.com/facebook/rocksdb/pull/3637

Differential Revision: D7354373

Pulled By: ajkr

fbshipit-source-id: 6816c7bbc192ed0fb944942b11c7074bf24eddf1
2018-03-23 12:56:52 -07:00
Adam Retter c5302a8a58 Java wrapper for Native Comparators
Summary:
This is an abstraction for working with custom Comparators implemented in native C++ code from Java. Native code must directly extend `rocksdb::Comparator`. When the native code comparator is compiled into the RocksDB codebase, you can then create a Java Class, and JNI stub to wrap it.

Useful if the C++/JNI barrier overhead is too much for your applications comparator performance.

An example is provided in `java/rocksjni/native_comparator_wrapper_test.cc` and `java/src/main/java/org/rocksdb/NativeComparatorWrapperTest.java`.
Closes https://github.com/facebook/rocksdb/pull/3334

Differential Revision: D7172605

Pulled By: miasantreble

fbshipit-source-id: e24b7eb267a3bcb6afa214e0379a1d5e8a2ceabe
2018-03-08 11:27:42 -08:00
Yi Wu b864bc9b5b Blob DB: Improve FIFO eviction
Summary:
Improving blob db FIFO eviction with the following changes,
* Change blob_dir_size to max_db_size. Take into account SST file size when computing DB size.
* FIFO now only take into account live sst files and live blob files. It is normal for disk usage to go over max_db_size because there are obsolete sst files and blob files pending deletion.
* FIFO eviction now also evict TTL blob files that's still open. It doesn't evict non-TTL blob files.
* If FIFO is triggered, it will pass an expiration and the current sequence number to compaction filter. Compaction filter will then filter inlined keys to evict those with an earlier expiration and smaller sequence number. So call LSM FIFO.
* Compaction filter also filter those blob indexes where corresponding blob file is gone.
* Add an event listener to listen compaction/flush event and update sst file size.
* Implement DB::Close() to make sure base db, as well as event listener and compaction filter, destruct before blob db.
* More blob db statistics around FIFO.
* Fix some locking issue when accessing a blob file.
Closes https://github.com/facebook/rocksdb/pull/3556

Differential Revision: D7139328

Pulled By: yiwu-arbug

fbshipit-source-id: ea5edb07b33dfceacb2682f4789bea61de28bbfa
2018-03-06 11:57:42 -08:00
Pooya Shareghi 0a2354ca8f Added bytes XOR merge operator
Summary:
Closes https://github.com/facebook/rocksdb/pull/575

I fixed the merge conflicts etc.
Closes https://github.com/facebook/rocksdb/pull/3065

Differential Revision: D7128233

Pulled By: sagar0

fbshipit-source-id: 2c23a48c9f0432c290b0cd16a12fb691bb37820c
2018-03-06 10:27:36 -08:00
Adam Retter 2ac988c67e Add TransactionDB and OptimisticTransactionDB to the Java API
Summary:
Closes https://github.com/facebook/rocksdb/issues/697
Closes https://github.com/facebook/rocksdb/issues/1151
Closes https://github.com/facebook/rocksdb/pull/1298

Differential Revision: D7131402

Pulled By: sagar0

fbshipit-source-id: bcd34ce95ed88cc641786089ff4232df7b2f089f
2018-03-02 10:34:13 -08:00
Siying Dong 2f1a3a4d74 Refactor ReadBlockContents()
Summary:
Divide ReadBlockContents() to multiple sub-functions. Maintaining the input and intermediate data in a new class BlockFetcher.
I hope in general it makes the code easier to maintain.
Another motivation to do it is to clearly divide the logic before file reading and after file reading. The refactor will help us evaluate how can we make I/O async in the future.
Closes https://github.com/facebook/rocksdb/pull/3244

Differential Revision: D6520983

Pulled By: siying

fbshipit-source-id: 338d90bc0338472d46be7a7682028dc9114b12e9
2017-12-11 15:27:32 -08:00
Yi Wu dd49f89466 Fix TARGETS lint warnings.
Summary:
Fix buckifier script and regenerate TARGETS file with no lint warnings.
Closes https://github.com/facebook/rocksdb/pull/3170

Differential Revision: D6328993

Pulled By: yiwu-arbug

fbshipit-source-id: 17d0e4ed92f676f35fed76659386611cc72b00b2
2017-11-15 14:28:34 -08:00
Yi Wu 42564ada53 Blob DB: not using PinnableSlice move assignment
Summary:
The current implementation of PinnableSlice move assignment have an issue #3163. We are moving away from it instead of try to get the move assignment right, since it is too tricky.
Closes https://github.com/facebook/rocksdb/pull/3164

Differential Revision: D6319201

Pulled By: yiwu-arbug

fbshipit-source-id: 8f3279021f3710da4a4caa14fd238ed2df902c48
2017-11-13 18:12:20 -08:00
Maysam Yabandeh 60d83df23d WritePrepared Txn: Move DB class to its own file
Summary:
Move  WritePreparedTxnDB from pessimistic_transaction_db.h to its own header, write_prepared_txn_db.h
Closes https://github.com/facebook/rocksdb/pull/3114

Differential Revision: D6220987

Pulled By: maysamyabandeh

fbshipit-source-id: 18893fb4fdc6b809fe117dabb544080f9b4a301b
2017-11-02 11:14:30 -07:00
Yi Wu 31d3e41810 PinnableSlice move assignment
Summary:
Allow `std::move(pinnable_slice)`.
Closes https://github.com/facebook/rocksdb/pull/2997

Differential Revision: D6036782

Pulled By: yiwu-arbug

fbshipit-source-id: 583fb0419a97e437ff530f4305822341cd3381fa
2017-10-12 18:28:24 -07:00
Adam Retter 560e984995 Added CompactionFilterFactory support to RocksJava
Summary:
This PR also includes some cleanup, bugfixes and refactoring of the Java API. However these are really pre-cursors on the road to CompactionFilterFactory support.
Closes https://github.com/facebook/rocksdb/pull/1241

Differential Revision: D6012778

Pulled By: sagar0

fbshipit-source-id: 0774465940ee99001a78906e4fed4ef57068ad5c
2017-10-12 11:12:16 -07:00
Yi Wu d1b74b0c82 WritePrepared Txn: Compaction/Flush
Summary:
Update Compaction/Flush to support WritePreparedTxnDB: Add SnapshotChecker which is a proxy to query WritePreparedTxnDB::IsInSnapshot. Pass SnapshotChecker to DBImpl on WritePreparedTxnDB open. CompactionIterator use it to check if a key has been committed and if it is visible to a snapshot. In CompactionIterator:
* check if key has been committed. If not, output uncommitted keys AS-IS.
* use SnapshotChecker to check if key is visible to a snapshot when in need.
* do not output key with seq = 0 if the key is not committed.
Closes https://github.com/facebook/rocksdb/pull/2926

Differential Revision: D5902907

Pulled By: yiwu-arbug

fbshipit-source-id: 945e037fdf0aa652dc5ba0ad879461040baa0320
2017-10-06 10:41:53 -07:00
Sagar Vemuri c8f3606731 Expose LoadLatestOptions, LoadOptionsFromFile and GetLatestOptionsFileName APIs in RocksJava
Summary:
JNI wrappers for LoadLatestOptions, LoadOptionsFromFile and GetLatestOptionsFileName APIs.
Closes https://github.com/facebook/rocksdb/pull/2898

Differential Revision: D5857934

Pulled By: sagar0

fbshipit-source-id: 68b79e83eab8de9416e3f1fef73e11cf7947e90a
2017-09-21 17:29:13 -07:00
Kamalalochana Subbaiah e612e31740 Updated CRC32 Power Optimization Changes
Summary:
Support for PowerPC Architecture
Detecting AltiVec Support
Closes https://github.com/facebook/rocksdb/pull/2716

Differential Revision: D5606836

Pulled By: siying

fbshipit-source-id: 720262453b1546e5fdbbc668eff56848164113f3
2017-08-31 14:16:30 -07:00
Pengchao Wang 825a22c00c garbage collect tombstones in merge operator
Summary:
Remove cassandra tombstone when reaching the max compaction level (full merge). if all columns collected key will be removed in next compaction via compaction filter
Closes https://github.com/facebook/rocksdb/pull/2791

Reviewed By: sagar0

Differential Revision: D5722465

Pulled By: wpc

fbshipit-source-id: 61e9898a5686551653a16383255aeaab3197e65e
2017-08-31 10:11:54 -07:00
Maysam Yabandeh 26ac24f199 Add more unit test to write_prepared txns
Summary: Closes https://github.com/facebook/rocksdb/pull/2798

Differential Revision: D5724173

Pulled By: maysamyabandeh

fbshipit-source-id: fb6b782d933fb4be315b1a231a6a67a66fdc9c96
2017-08-31 09:41:27 -07:00
Maysam Yabandeh bdc056f8aa Refactor PessimisticTransaction
Summary:
This patch splits Commit and Prepare into lock-related logic and db-write-related logic. It moves lock-related logic to PessimisticTransaction to be reused by all children classes and movies the existing impl of db-write-related to PrepareInternal, CommitSingleInternal, and CommitInternal in WriteCommittedTxnImpl.
Closes https://github.com/facebook/rocksdb/pull/2691

Differential Revision: D5569464

Pulled By: maysamyabandeh

fbshipit-source-id: d1b8698e69801a4126c7bc211745d05c636f5325
2017-08-07 16:12:29 -07:00
Maysam Yabandeh c9804e007a Refactor TransactionDBImpl
Summary:
This opens space for the new implementations of TransactionDBImpl such as WritePreparedTxnDBImpl that has a different policy of how to write to DB.
Closes https://github.com/facebook/rocksdb/pull/2689

Differential Revision: D5568918

Pulled By: maysamyabandeh

fbshipit-source-id: f7eac866e175daf3793ae79da108f65cc7dc7b25
2017-08-05 17:26:15 -07:00
Maysam Yabandeh c3d5c4d38a Refactor TransactionImpl
Summary:
This patch refactors TransactionImpl by separating the logic for pessimistic concurrency control from the implementation of how to write the data to rocksdb. The existing implementation is named WriteCommittedTxnImpl as it writes committed data to the db. A template named WritePreparedTxnImpl is also added which will be later completed to provide a an alternative implementation.
Closes https://github.com/facebook/rocksdb/pull/2676

Differential Revision: D5549998

Pulled By: maysamyabandeh

fbshipit-source-id: 16298e86b43ca4849324c1f35c731913c6d17bec
2017-08-03 08:57:22 -07:00
Yi Wu 1900771bd2 Dump Blob DB options to info log
Summary:
* Dump blob db options to info log
* Remove BlobDBOptionsImpl to disallow dynamic cast *BlobDBOptions into *BlobDBOptionsImpl. Move options there to be constants or into BlobDBOptions. The dynamic cast is broken after #2645
* Change some of the default options
* Remove blob_db_options.min_blob_size, which is unimplemented. Will implement it soon.
Closes https://github.com/facebook/rocksdb/pull/2671

Differential Revision: D5529912

Pulled By: yiwu-arbug

fbshipit-source-id: dcd58ca981db5bcc7f123b65a0d6f6ae0dc703c7
2017-08-01 13:01:47 -07:00
Yi Wu 6083bc79f8 Blob DB TTL extractor
Summary:
Introducing blob_db::TTLExtractor to replace extract_ttl_fn. The TTL
extractor can be use to extract TTL from keys insert with Put or
WriteBatch. Change over existing extract_ttl_fn are:
* If value is changed, it will be return via std::string* (rather than Slice*). With Slice* the new value has to be part of the existing value. With std::string* the limitation is removed.
* It can optionally return TTL or expiration.

Other changes in this PR:
* replace `std::chrono::system_clock` with `Env::NowMicros` so that I can mock time in tests.
* add several TTL tests.
* other minor naming change.
Closes https://github.com/facebook/rocksdb/pull/2659

Differential Revision: D5512627

Pulled By: yiwu-arbug

fbshipit-source-id: 0dfcb00d74d060b8534c6130c808e4d5d0a54440
2017-07-27 23:26:04 -07:00
Siying Dong c281b44829 Revert "CRC32 Power Optimization Changes"
Summary:
This reverts commit 2289d38115.
Closes https://github.com/facebook/rocksdb/pull/2652

Differential Revision: D5506163

Pulled By: siying

fbshipit-source-id: 105e31dd9d99090453a6b9f32c165206cd3affa3
2017-07-26 19:31:36 -07:00
Kamalalochana Subbaiah 2289d38115 CRC32 Power Optimization Changes
Summary:
Support for PowerPC Architecture
Detecting AltiVec Support
Closes https://github.com/facebook/rocksdb/pull/2353

Differential Revision: D5210948

Pulled By: siying

fbshipit-source-id: 859a8c063d37697addd89ba2b8a14e5efd5d24bf
2017-07-26 09:42:29 -07:00
Pengchao Wang 534c255c7a Cassandra compaction filter for purge expired columns and rows
Summary:
Major changes in this PR:
* Implement CassandraCompactionFilter to remove expired columns and rows (if all column expired)
* Move cassandra related code from utilities/merge_operators/cassandra to utilities/cassandra/*
* Switch to use shared_ptr<> from uniqu_ptr for Column membership management in RowValue. Since columns do have multiple owners in Merge and GC process, use shared_ptr helps make RowValue immutable.
* Rename cassandra_merge_test to cassandra_functional_test and add two TTL compaction related tests there.
Closes https://github.com/facebook/rocksdb/pull/2588

Differential Revision: D5430010

Pulled By: wpc

fbshipit-source-id: 9566c21e06de17491d486a68c70f52d501f27687
2017-07-21 14:57:44 -07:00