Commit graph

150 commits

Author SHA1 Message Date
Yu Zhang 8592517c89 Remove stale entries from L0 files when UDT is not persisted (#13035)
Summary:
When user-defined timestamps are not persisted, currently we replace the actual timestamp with min timestamp after an entry is output from compaction iterator. Compaction iterator won't be able to help with removing stale entries this way. This PR adds a wrapper iterator `TimestampStrippingIterator` for `MemTableIterator` that does the min timestamp replacement at the memtable iteration step. It is used by flush and can help remove stale entries from landing in L0 files.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/13035

Test Plan: Added unit test

Reviewed By: pdillinger, cbi42

Differential Revision: D63423682

Pulled By: jowlyzhang

fbshipit-source-id: 087dcc9cee97b9ea51b8d2b88dc91c2984d54e55
2024-10-14 12:28:35 -07:00
Yu Zhang 32dd657bad Add some per key optimization for UDT in memtable only feature (#13031)
Summary:
This PR added some optimizations for the per key handling for SST file for the user-defined timestamps in Memtable only feature. CPU profiling shows this part is a big culprit for regression. This optimization saves some string construction/destruction/appending/copying. vector operations like reserve/emplace_back.

When iterating keys in a block, we need to copy some shared bytes from previous key, put it together with the non shared bytes and find a right location to pad the min timestamp. Previously, we create a tmp local string buffer to first construct the key from its pieces, and then copying this local string's content into `IterKey`'s buffer. To avoid having this local string and to avoid this extra copy. Instead of piecing together the key in a local string first, we just track all the pieces that make this key in a reused Slice array. And then copy the pieces in order into `IterKey`'s buffer. Since the previous key should be kept intact while we are copying some shared bytes from it,  we added a secondary buffer in `IterKey` and alternate between primary buffer and secondary buffer.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/13031

Test Plan: Existing tests.

Reviewed By: ltamasi

Differential Revision: D63416531

Pulled By: jowlyzhang

fbshipit-source-id: 9819b0e02301a2dbc90621b2fe4f651bc912113c
2024-10-03 17:57:50 -07:00
Peter Dillinger 4d3518951a Option to decouple index and filter partitions (#12939)
Summary:
Partitioned metadata blocks were introduced back in 2017 to deal more gracefully with large DBs where RAM is relatively scarce and some data might be much colder than other data. The feature allows metadata blocks to compete for memory in the block cache against data blocks while alleviating tail latencies and thrash conditions that can arise with large metadata blocks (sometimes megabytes each) that can arise with large SST files. In general, the cost to partitioned metadata is more CPU in accesses (especially for filters where more binary search is needed before hashing can be used) and a bit more memory fragmentation and related overheads.

However the feature has always had a subtle limitation with a subtle effect on performance: index partitions and filter partitions must be cut at the same time, regardless of which wins the space race (hahaha) to metadata_block_size. Commonly filters will be a few times larger than indexes, so index partitions will be under-sized compared to filter (and data) blocks. While this does affect fragmentation and related overheads a bit, I suspect the bigger impact on performance is in the block cache. The coupling of the partition cuts would be defensible if the binary search done to find the filter block was used (on filter hit) to short-circuit binary search to an index partition, but that optimization has not been developed.

Consider two metadata blocks, an under-sized one and a normal-sized one, covering proportional sections of the key space with the same density of read queries. The under-sized one will be more prone to eviction from block cache because it is used less often. This is unfair because of its despite its proportionally smaller cost of keeping in block cache, and most of the cost of a miss to re-load it (random IO) is not proportional to the size (similar latency etc. up to ~32KB).

 ## This change

Adds a new table option decouple_partitioned_filters allows filter blocks and index blocks to be cut independently. To make this work, the partitioned filter block builder needs to know about the previous key, to generate an appropriate separator for the partition index. In most cases, BlockBasedTableBuilder already has easy access to the previous key to provide to the filter block builder.

This change includes refactoring to pass that previous key to the filter builder when available, with the filter building caching the previous key itself when unavailable, such as during compression dictionary training and some unit tests. Access to the previous key eliminates the need to track the previous prefix, which results in a small SST construction CPU win in prefix filtering cases, regardless of coupling, and possibly a small regression for some non-prefix cases, regardless of coupling, but still overall improvement especially with https://github.com/facebook/rocksdb/issues/12931.

Suggested follow-up:
* Update confusing use of "last key" to refer to "previous key"
* Expand unit test coverage with parallel compression and dictionary training
* Consider an option or enhancement to alleviate under-sized metadata blocks "at the end" of an SST file due to no coordination or awareness of when files are cut.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12939

Test Plan:
unit tests updated. Also did some unit test runs with "hard wired" usage of parallel compression and dictionary training code paths to ensure they were working. Also ran blackbox_crash_test for a while with the new feature.

 ## SST write performance (CPU)

Using the same testing setup as in https://github.com/facebook/rocksdb/issues/12931 but with -decouple_partitioned_filters=1 in the "after" configuration, which benchmarking shows makes almost no difference in terms of SST write CPU. "After" vs. "before" this PR
```
-partition_index_and_filters=0 -prefix_size=0 -whole_key_filtering=1
923691 vs. 924851 (-0.13%)
-partition_index_and_filters=0 -prefix_size=8 -whole_key_filtering=0
921398 vs. 922973 (-0.17%)
-partition_index_and_filters=0 -prefix_size=8 -whole_key_filtering=1
902259 vs. 908756 (-0.71%)
-partition_index_and_filters=1 -prefix_size=8 -whole_key_filtering=0
917932 vs. 916901 (+0.60%)
-partition_index_and_filters=1 -prefix_size=8 -whole_key_filtering=0
912755 vs. 907298 (+0.60%)
-partition_index_and_filters=1 -prefix_size=8 -whole_key_filtering=1
899754 vs. 892433 (+0.82%)
```
I think this is a pretty good trade, especially in attracting more movement toward partitioned configurations.

 ## Read performance

Let's see how decoupling affects read performance across various degrees of memory constraint. To simplify LSM structure, we're using FIFO compaction. Since decoupling will overall increase metadata block size, we control for this somewhat with an extra "before" configuration with larger metadata block size setting (8k instead of 4k). Basic setup:

```
(for CS in 0300 1200; do TEST_TMPDIR=/dev/shm/rocksdb1 ./db_bench -benchmarks=fillrandom,flush,readrandom,block_cache_entry_stats -num=5000000 -duration=30 -disable_wal=1 -write_buffer_size=30000000 -bloom_bits=10 -compaction_style=2 -fifo_compaction_max_table_files_size_mb=10000 -fifo_compaction_allow_compaction=0 -partition_index_and_filters=1 -statistics=1 -cache_size=${CS}000000 -metadata_block_size=4096 -decouple_partitioned_filters=1 2>&1 | tee results-$CS; done)
```

And read ops/s results:

```CSV
Cache size MB,After/decoupled/4k,Before/4k,Before/8k
3,15593,15158,12826
6,16295,16693,14134
10,20427,20813,18459
20,27035,26836,27384
30,33250,31810,33846
60,35518,32585,35329
100,36612,31805,35292
300,35780,31492,35481
1000,34145,31551,35411
1100,35219,31380,34302
1200,35060,31037,34322
```

If you graph this with log scale on the X axis (internal link: https://pxl.cl/5qKRc), you see that the decoupled/4k configuration is essentially the best of both the before/4k and before/8k configurations: handles really tight memory closer to the old 4k configuration and handles generous memory closer to the old 8k configuration.

Reviewed By: jowlyzhang

Differential Revision: D61376772

Pulled By: pdillinger

fbshipit-source-id: fc2af2aee44290e2d9620f79651a30640799e01f
2024-08-16 15:34:31 -07:00
Yu Zhang c110091d36 Support read timestamp in ldb (#12641)
Summary:
As titled. Also updated sst_dump to print out user-defined timestamp separately and in human readable format.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12641

Test Plan:
manually tested:
Example success run:
./ldb --db=$TEST_DB multi_get_entity 0x00000000000000950000000000000120 --key_hex --column_family=7  --read_timestamp=1115613683797942 --value_hex
0x00000000000000950000000000000120 ==> :0x0E0000000A0B080906070405020300011E1F1C1D1A1B181916171415121310112E2F2C2D2A2B282926272425222320213E3F3C3D3A3B383936373435323330314E4F4C4D4A4B484946474445424340415E5F5C5D5A5B58595657545552535051
Example failed run:
Failed: GetEntity failed: Invalid argument: column family enables user-defined timestamp while --read_timestamp is not a valid uint64 value.

sst_dump print out:
'000000000000015D000000000000012B000000000000013B|timestamp:1113554493256671' seq:2330405, type:1 => 010000000504070609080B0A0D0C0F0E111013121514171619181B1A1D1C1F1E212023222524272629282B2A2D2C2F2E313033323534373639383B3A3D3C3F3E

Reviewed By: ltamasi

Differential Revision: D57297006

Pulled By: jowlyzhang

fbshipit-source-id: 8486d91468e4f6c0d42dca3c9629f1c45a92bf5a
2024-05-13 15:43:12 -07:00
Yu Zhang 13e1c32a18 Follow ups for TimedPut and write time property (#12455)
Summary:
This PR contains a few follow ups from https://github.com/facebook/rocksdb/issues/12419 and https://github.com/facebook/rocksdb/issues/12428 including:

1) Handle a special case for `WriteBatch::TimedPut`. When the user specified write time is `std::numeric_limits<uint64_t>::max()`, it's not treated as an error, but it instead creates and writes a regular `Put` entry.

2) Update the `InternalIterator::write_unix_time` APIs to handle `kTypeValuePreferredSeqno` entries.

3) FlushJob is updated to use the seqno to time mapping copy in `SuperVersion`. FlushJob currently copy the DB's seqno to time mapping while holding db mutex and only copies the part of interest, a.k.a, the part that only goes back to the earliest sequence number of the to-be-flushed memtables. While updating FlushJob to use the mapping copy in `SuperVersion`, it's given access to the full mapping to help cover the need to convert `kTypeValuePreferredSeqno`'s write time to preferred seqno as much as possible.

Test plans:
Added unit tests

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12455

Reviewed By: pdillinger

Differential Revision: D55165422

Pulled By: jowlyzhang

fbshipit-source-id: dc022653077f678c24661de5743146a74cce4b47
2024-03-21 10:00:15 -07:00
Yu Zhang f2546b6623 Support returning write unix time in iterator property (#12428)
Summary:
This PR adds support to return data's approximate unix write time in the iterator property API. The general implementation is:
1) If the entry comes from a SST file, the sequence number to time mapping recorded in that file's table properties will be used to deduce the entry's write time from its sequence number. If no such recording is available, `std::numeric_limits<uint64_t>::max()` is returned to indicate the write time is unknown except if the entry's sequence number is zero, in which case, 0 is returned. This also means that even if `preclude_last_level_data_seconds` and `preserve_internal_time_seconds` can be toggled off between DB reopens, as long as the SST file's table property has the mapping available, the entry's write time can be deduced and returned.

2) If the entry comes from memtable, we will use the DB's sequence number to write time mapping to do similar things. A copy of the DB's seqno to write time mapping is kept in SuperVersion to allow iterators to have lock free access. This also means a new `SuperVersion` is installed each time DB's seqno to time mapping updates, which is originally proposed by Peter in  https://github.com/facebook/rocksdb/issues/11928 . Similarly, if the feature is not enabled, `std::numeric_limits<uint64_t>::max()` is returned to indicate the write time is unknown.

Needed follow up:
1) The write time for `kTypeValuePreferredSeqno` should be special cased, where it's already specified by the user, so we can directly return it.

2) Flush job can be updated to use DB's seqno to time mapping copy in the SuperVersion.

3) Handle the case when `TimedPut` is called with a write time that is `std::numeric_limits<uint64_t>::max()`. We can make it a regular `Put`.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12428

Test Plan: Added unit test

Reviewed By: pdillinger

Differential Revision: D54967067

Pulled By: jowlyzhang

fbshipit-source-id: c795b1b7ec142e09e53f2ed3461cf719833cb37a
2024-03-15 15:37:37 -07:00
Yu Zhang 1104eaa35e Add initial support for TimedPut API (#12419)
Summary:
This PR adds support for `TimedPut` API. We introduced a new type `kTypeValuePreferredSeqno` for entries added to the DB via the `TimedPut` API.

The life cycle of such an entry on the write/flush/compaction paths are:

1) It is initially added to memtable as:
`<user_key, seq, kTypeValuePreferredSeqno>: {value, write_unix_time}`

2) When it's flushed to L0 sst files, it's converted to:
`<user_key, seq, kTypeValuePreferredSeqno>: {value, preferred_seqno}`
 when we have easy access to the seqno to time mapping.

3) During compaction, if certain conditions are met, we swap in the `preferred_seqno` and the entry will become:
`<user_key, preferred_seqno, kTypeValue>: value`. This step helps fast track these entries to the cold tier if they are eligible after the sequence number swap.

On the read path:
A `kTypeValuePreferredSeqno` entry acts the same as a `kTypeValue` entry, the unix_write_time/preferred seqno part packed in value is completely ignored.

Needed follow ups:
1) The seqno to time mapping accessible in flush needs to be extended to cover the `write_unix_time` for possible `kTypeValuePreferredSeqno` entries. This also means we need to track these `write_unix_time` in memtable.

2) Compaction filter support for the new `kTypeValuePreferredSeqno` type for feature parity with other `kTypeValue` and equivalent types.

3) Stress test coverage for the feature

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12419

Test Plan: Added unit tests

Reviewed By: pdillinger

Differential Revision: D54920296

Pulled By: jowlyzhang

fbshipit-source-id: c8b43f7a7c465e569141770e93c748371ff1da9e
2024-03-14 15:44:55 -07:00
Yu Zhang e3e8fbb497 Add a separate range classes for internal usage (#12071)
Summary:
Introduce some different range classes `UserKeyRange` and `UserKeyRangePtr` to be used by internal implementation. The `Range` class is used in both public APIs like `DB::GetApproximateSizes`, `DB::GetApproximateMemTableStats`, `DB::GetPropertiesOfTablesInRange` etc and internal implementations like `ColumnFamilyData::RangesOverlapWithMemtables`, `VersionSet::GetPropertiesOfTablesInRange`.

These APIs have different expectations of what keys this range class contain.  Public API users are supposed to populate the range with the user keys without timestamp, in the same way that point lookup and range scan APIs' key input only expect the user key without timestamp. The internal APIs implementation expect a user key whose format is compatible with the user comparator, a.k.a a user key with the timestamp.

This PR contains:
1) introducing counterpart range class `UserKeyRange` `UserKeyRangePtr` for internal implementation while leave the existing `Range` and `RangePtr` class only for public APIs. Internal implementations are updated to use this new class instead.
2) add user-defined timestamp support for `DB::GetPropertiesOfTablesInRange` API and `DeleteFilesInRanges` API.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12071

Test Plan:
existing tests
Added test for `DB::GetPropertiesOfTablesInRange` and `DeleteFilesInRanges` APIs for when user-defined timestamp is enabled.
The change in external_file_ingestion_job doesn't have a user-defined timestamp enabled test case coverage, will add one in a follow up PR that adds file ingestion support for UDT.

Reviewed By: ltamasi

Differential Revision: D53292608

Pulled By: jowlyzhang

fbshipit-source-id: 9a9279e23c640a6d8f8232636501a95aef7638b8
2024-02-06 18:35:36 -08:00
Peter Dillinger 76c834e441 Remove 'virtual' when implied by 'override' (#12319)
Summary:
... to follow modern C++ style / idioms.

Used this hack:
```
for FILE in `cat my_list_of_files`; do perl -pi -e 'BEGIN{undef $/;} s/ virtual( [^;{]* override)/$1/smg' $FILE; done
```

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12319

Test Plan: existing tests, CI

Reviewed By: jaykorean

Differential Revision: D53275303

Pulled By: pdillinger

fbshipit-source-id: bc0881af270aa8ef4d0ae4f44c5a6614b6407377
2024-01-31 13:14:42 -08:00
Yu Zhang 071a146fa0 Add support for range deletion when user timestamps are not persisted (#12254)
Summary:
For the user defined timestamps in memtable only feature, some special handling for range deletion blocks are needed since both the key (start_key) and the value (end_key) of a range tombstone can contain user-defined timestamps. Handling for the key is taken care of in the same way as the other data blocks in the block based table. This PR adds the special handling needed for the value (end_key) part. This includes:

1) On the write path, when L0 SST files are first created from flush, user-defined timestamps are removed from an end key of a range tombstone. There are places where it's logically removed (replaced with a min timestamp) because there is still logic with the running comparator that expects a user key that contains timestamp. And in the block based builder, it is eventually physically removed before persisted in a block.

2) On the read path, when range deletion block is being read, we artificially pad a min timestamp to the end key of a range tombstone in `BlockBasedTableReader`.

3) For file boundary `FileMetaData.largest`, we artificially pad a max timestamp to it if it contains a range deletion sentinel. Anytime when range deletion end_key is used to update file boundaries, it's using max timestamp instead of the range tombstone's actual timestamp to mark it as an exclusive end. d69628e6ce/db/dbformat.h (L923-L935)
This max timestamp is removed when in memory `FileMetaData.largest` is persisted into Manifest, we pad it back when it's read from Manifest while handling related `VersionEdit` in `VersionEditHandler`.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12254

Test Plan: Added unit test and enabled this feature combination's stress test.

Reviewed By: cbi42

Differential Revision: D52965527

Pulled By: jowlyzhang

fbshipit-source-id: e8315f8a2c5268e2ae0f7aec8012c266b86df985
2024-01-29 11:37:34 -08:00
leipeng 906c6683ed InternalKey::Set: remove redundant assign (#12194)
Summary:
InternalKey::Set: remove redundant assign

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12194

Reviewed By: cbi42

Differential Revision: D52457542

Pulled By: ajkr

fbshipit-source-id: 329983a8734ff38ffd93018bbbe112b4a23b5c11
2024-01-02 11:17:39 -08:00
Changyu Bi fb5c8c7ea3 Do not compare op_type in WithinPenultimateLevelOutputRange() (#12081)
Summary:
`WithinPenultimateLevelOutputRange()` is updated in https://github.com/facebook/rocksdb/issues/12063 to check internal key range. However, op_type of a key can change during compaction, e.g. MERGE -> PUT, which makes a key larger and becomes out of penultimate output range. This has caused stress test failures with error message "Unsafe to store Seq later than snapshot in the last level if per_key_placement is enabled". So update `WithinPenultimateLevelOutputRange()` to only check user key and sequence number.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/12081

Test Plan:
* This repro can produce the corruption within a few runs. Ran it a few times after the fix and did not see Corruption failure.
```
python3 ./tools/db_crashtest.py whitebox --test_tiered_storage --random_kill_odd=888887 --use_merge=1 --writepercent=100 --readpercent=0 --prefixpercent=0 --delpercent=0 --delrangepercent=0 --iterpercent=0 --write_buffer_size=419430 --column_families=1 --read_fault_one_in=0 --write_fault_one_in=0
```

Reviewed By: ajkr

Differential Revision: D51481202

Pulled By: cbi42

fbshipit-source-id: cad6b65099733e03071b496e752bbdb09cf4db82
2023-11-20 17:07:28 -08:00
Yu Zhang 6a3da5635e Add documentation to some formatting util functions (#11674)
Summary:
As titled, mostly adding documentation. While updating one usage of these util functions in the external file ingestion job based on code inspection.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/11674

Test Plan:
```
make check
```

Note that no unit test was added or updated to check the change in the external file ingestion flow works. This is because user-defined timestamp doesn't support bulk loading yet. There could be other missing pieces that are needed to make this flow functional and testable. That work is separately tracked and unit tests will be added then.

Reviewed By: cbi42

Differential Revision: D48271338

Pulled By: jowlyzhang

fbshipit-source-id: c05c3440f1c08632dd0de51b563a30b44b4eb8b5
2023-08-14 22:04:18 -07:00
Yu Zhang 15053f3ab4 Logically strip timestamp during flush (#11557)
Summary:
Logically strip the user-defined timestamp when L0 files are created during flush when `AdvancedColumnFamilyOptions.persist_user_defined_timestamps` is false. Logically stripping timestamp here means replacing the original user-defined timestamp with a mininum timestamp, which for now is hard coded to be all zeros bytes.

While working on this, I caught a missing piece on the `BlockBuilder` level for this feature. The current quick path `std::min(buffer_size, last_key_size)` needs a bit tweaking to work for this feature. When user-defined timestamp is stripped during block building, on writing first entry or right after resetting, `buffer` is empty and `buffer_size` is zero as usual. However, in follow-up writes, depending on the size of the stripped user-defined timestamp, and the size of the value, what's in `buffer` can sometimes be smaller than `last_key_size`, leading `std::min(buffer_size, last_key_size)` to truncate the `last_key`. Previous test doesn't caught the bug because in those tests, the size of the stripped user-defined timestamps bytes is smaller than the length of the value. In order to avoid the conditional operation, this PR changed the original trivial `std::min` operation into an arithmetic operation. Since this is a change in a hot and performance critical path, I did the following benchmark to check no observable regression is introduced.
```TEST_TMPDIR=/dev/shm/rocksdb1 ./db_bench -benchmarks=fillseq -memtablerep=vector -allow_concurrent_memtable_write=false -num=50000000```
Compiled with DEBUG_LEVEL=0
Test vs. control runs simulaneous for better accuracy, units = ops/sec
                       PR  vs base:
Round 1: 350652 vs 349055
Round 2: 365733 vs 364308
Round 3: 355681 vs 354475

Pull Request resolved: https://github.com/facebook/rocksdb/pull/11557

Test Plan:
New timestamp specific test added or existing tests augmented, both are parameterized with `UserDefinedTimestampTestMode`:
`UserDefinedTimestampTestMode::kNormal` -> UDT feature enabled, write / read with min timestamp
`UserDefinedTimestampTestMode::kStripUserDefinedTimestamps` -> UDT feature enabled, write / read with min timestamp, set Options.persist_user_defined_timestamps to false.

```
make all check
./db_wal_test --gtest_filter="*WithTimestamp*"
./flush_job_test --gtest_filter="*WithTimestamp*"
./repair_test --gtest_filter="*WithTimestamp*"
./block_based_table_reader_test
```

Reviewed By: pdillinger

Differential Revision: D47027664

Pulled By: jowlyzhang

fbshipit-source-id: e729193b6334dfc63aaa736d684d907a022571f5
2023-06-29 15:50:50 -07:00
leipeng ddfcbea3e1 IterKey: change space_[32] to 39 to utilize padding space (#10633)
Summary:
This PR utilize padding space.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10633

Reviewed By: pdillinger

Differential Revision: D46410978

Pulled By: ajkr

fbshipit-source-id: 23ec757b1eea9221c1390971e39d341c6b7f2003
2023-06-06 11:19:15 -07:00
Yu Zhang d1ae7f6c41 Add support to strip / pad timestamp when writing / reading a block (#11472)
Summary:
This patch adds support in `BlockBuilder` to strip user-defined timestamp from the `key` added via `Add(key, value)` and its equivalent APIs. The stripping logic is different when the key is either a user key or an internal key, so the `BlockBuilder` is created with a flag to indicate that. This patch also add support on the read path to APIs `NewIndexIterator`, `NewDataIterator` to support pad a min timestamp.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/11472

Test Plan:
Three test modes are added to parameterize existing tests:
UserDefinedTimestampTestMode::kNone -> UDT feature is not enabled
UserDefinedTimestampTestMode::kNormal -> UDT feature enabled, write / read with min timestamp
UserDefinedTimestampTestMode::kStripUserDefinedTimestamps -> UDT feature enabled, write / read with min timestamp, set `persist_user_defined_timestamps` where it applies to false.
The tests read/write with min timestamp so that point read and range scan can correctly read values in all three test modes.

`block_test` are parameterized to run with above three test modes and some additional parameteriazation

```
make all check
./block_test --gtest_filter="P/BlockTest*"
./block_test --gtest_filter="P/IndexBlockTest*"
```

Reviewed By: ltamasi

Differential Revision: D46200539

Pulled By: jowlyzhang

fbshipit-source-id: 59f5d6b584639976b69c2943eba723bd47d9b3c0
2023-05-25 15:41:32 -07:00
Changyu Bi 229297d1b8 Refactor AddRangeDels() + consider range tombstone during compaction file cutting (#11113)
Summary:
A second attempt after https://github.com/facebook/rocksdb/issues/10802, with bug fixes and refactoring. This PR updates compaction logic to take range tombstones into account when determining whether to cut the current compaction output file (https://github.com/facebook/rocksdb/issues/4811). Before this change, only point keys were considered, and range tombstones could cause large compactions. For example, if the current compaction outputs is a range tombstone [a, b) and 2 point keys y, z, they would be added to the same file, and may overlap with too many files in the next level and cause a large compaction in the future. This PR also includes ajkr's effort to simplify the logic to add range tombstones to compaction output files in `AddRangeDels()` ([https://github.com/facebook/rocksdb/issues/11078](https://github.com/facebook/rocksdb/pull/11078#issuecomment-1386078861)).

The main change is for `CompactionIterator` to emit range tombstone start keys to be processed by `CompactionOutputs`. A new class `CompactionMergingIterator` is introduced to replace `MergingIterator` under `CompactionIterator` to enable emitting of range tombstone start keys. Further improvement after this PR include cutting compaction output at some grandparent boundary key (instead of the next output key) when cutting within a range tombstone to reduce overlap with grandparents.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/11113

Test Plan:
* added unit test in db_range_del_test
* crash test with a small key range: `python3 tools/db_crashtest.py blackbox --simple --max_key=100 --interval=600 --write_buffer_size=262144 --target_file_size_base=256 --max_bytes_for_level_base=262144 --block_size=128 --value_size_mult=33 --subcompactions=10 --use_multiget=1 --delpercent=3 --delrangepercent=2 --verify_iterator_with_expected_state_one_in=2 --num_iterations=10`

Reviewed By: ajkr

Differential Revision: D42655709

Pulled By: cbi42

fbshipit-source-id: 8367e36ef5640e8f21c14a3855d4a8d6e360a34c
2023-02-22 12:28:18 -08:00
Changyu Bi 6cdb7af9f8 Remove copying of range tombstones keys in iterator (#10878)
Summary:
In MergingIterator, if a range tombstone's start or end key is added to minHeap/maxHeap, the key is copied. This PR removes the copying of range tombstone keys by adding InternalKey comparator that compares `Slice` for internal key and `ParsedInternalKey` directly.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10878

Test Plan:
- existing UT
- ran all flavors of stress test through sandcastle
- benchmarks: I did not get improvement when compiling with DEBUG_LEVEL=0, and saw many noise. With `OPTIMIZE_LEVEL="-O3" USE_LTO=1` I do see improvement.
```
# Favorable set up: half of the writes are DeleteRange.
TEST_TMPDIR=/tmp/rocksdb-rangedel-test-all-tombstone ./db_bench --benchmarks=fillseq,levelstats --writes_per_range_tombstone=1 --max_num_range_tombstones=1000000 --range_tombstone_width=2 --num=1000000 --max_bytes_for_level_base=4194304 --disable_auto_compactions --write_buffer_size=33554432 --key_size=50

# benchmark command
TEST_TMPDIR=/tmp/rocksdb-rangedel-test-all-tombstone ./db_bench --benchmarks=readseq[-W1][-X5],levelstats --use_existing_db=true --cache_size=3221225472  --disable_auto_compactions=true --avoid_flush_during_recovery=true --seek_nexts=100 --reads=1000000 --num=1000000 --threads=25

# main
readseq [AVG    5 runs] : 26017977 (± 371077) ops/sec; 3721.9 (± 53.1) MB/sec
readseq [MEDIAN 5 runs] : 26096905 ops/sec; 3733.2 MB/sec

# this PR
readseq [AVG    5 runs] : 27481724 (± 568758) ops/sec; 3931.3 (± 81.4) MB/sec
readseq [MEDIAN 5 runs] : 27323957 ops/sec; 3908.7 MB/sec
```

Reviewed By: ajkr

Differential Revision: D40711170

Pulled By: cbi42

fbshipit-source-id: 708cb584e2bd085a9ce0d2ef6a420489f721717f
2022-11-28 19:27:22 -08:00
Yanqin Jin 7d26e4c5a3 Basic Support for Merge with user-defined timestamp (#10819)
Summary:
This PR implements the originally disabled `Merge()` APIs when user-defined timestamp is enabled.

Simplest usage:
```cpp
// assume string append merge op is used with '.' as delimiter.
// ts1 < ts2
db->Put(WriteOptions(), "key", ts1, "v0");
db->Merge(WriteOptions(), "key", ts2, "1");
ReadOptions ro;
ro.timestamp = &ts2;
db->Get(ro, "key", &value);
ASSERT_EQ("v0.1", value);
```

Some code comments are added for clarity.

Note: support for timestamp in `DB::GetMergeOperands()` will be done in a follow-up PR.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10819

Test Plan: make check

Reviewed By: ltamasi

Differential Revision: D40603195

Pulled By: riversand963

fbshipit-source-id: f96d6f183258f3392d80377025529f7660503013
2022-10-31 22:28:58 -07:00
Changyu Bi 9f2363f4c4 User-defined timestamp support for DeleteRange() (#10661)
Summary:
Add user-defined timestamp support for range deletion. The new API is `DeleteRange(opt, cf, begin_key, end_key, ts)`. Most of the change is to update the comparator to compare without timestamp. Other than that, major changes are
- internal range tombstone data structures (`FragmentedRangeTombstoneList`, `RangeTombstone`, etc.) to store timestamps.
- Garbage collection of range tombstones and range tombstone covered keys during compaction.
- Get()/MultiGet() to return the timestamp of a range tombstone when needed.
- Get/Iterator with range tombstones bounded by readoptions.timestamp.
- timestamp crash test now issues DeleteRange by default.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10661

Test Plan:
- Added unit test: `make check`
- Stress test: `python3 tools/db_crashtest.py --enable_ts whitebox --readpercent=57 --prefixpercent=4 --writepercent=25 -delpercent=5 --iterpercent=5 --delrangepercent=4`
- Ran `db_bench` to measure regression when timestamp is not enabled. The tests are for write (with some range deletion) and iterate with DB fitting in memory: `./db_bench--benchmarks=fillrandom,seekrandom --writes_per_range_tombstone=200 --max_write_buffer_number=100 --min_write_buffer_number_to_merge=100 --writes=500000 --reads=500000 --seek_nexts=10 --disable_auto_compactions -disable_wal=true --max_num_range_tombstones=1000`.  Did not see consistent regression in no timestamp case.

| micros/op | fillrandom | seekrandom |
| --- | --- | --- |
|main| 2.58 |10.96|
|PR 10661| 2.68 |10.63|

Reviewed By: riversand963

Differential Revision: D39441192

Pulled By: cbi42

fbshipit-source-id: f05aca3c41605caf110daf0ff405919f300ddec2
2022-09-30 16:13:03 -07:00
Changyu Bi 30bc495c03 Skip swaths of range tombstone covered keys in merging iterator (2022 edition) (#10449)
Summary:
Delete range logic is moved from `DBIter` to `MergingIterator`, and `MergingIterator` will seek to the end of a range deletion if possible instead of scanning through each key and check with `RangeDelAggregator`.

With the invariant that a key in level L (consider memtable as the first level, each immutable and L0 as a separate level) has a larger sequence number than all keys in any level >L, a range tombstone `[start, end)` from level L covers all keys in its range in any level >L. This property motivates optimizations in iterator:
- in `Seek(target)`, if level L has a range tombstone `[start, end)` that covers `target.UserKey`, then for all levels > L, we can do Seek() on `end` instead of `target` to skip some range tombstone covered keys.
- in `Next()/Prev()`, if the current key is covered by a range tombstone `[start, end)` from level L, we can do `Seek` to `end` for all levels > L.

This PR implements the above optimizations in `MergingIterator`. As all range tombstone covered keys are now skipped in `MergingIterator`, the range tombstone logic is removed from `DBIter`. The idea in this PR is similar to https://github.com/facebook/rocksdb/issues/7317, but this PR leaves `InternalIterator` interface mostly unchanged. **Credit**: the cascading seek optimization and the sentinel key (discussed below) are inspired by [Pebble](https://github.com/cockroachdb/pebble/blob/master/merging_iter.go) and suggested by ajkr in https://github.com/facebook/rocksdb/issues/7317. The two optimizations are mostly implemented in `SeekImpl()/SeekForPrevImpl()` and `IsNextDeleted()/IsPrevDeleted()` in `merging_iterator.cc`. See comments for each method for more detail.

One notable change is that the minHeap/maxHeap used by `MergingIterator` now contains range tombstone end keys besides point key iterators. This helps to reduce the number of key comparisons. For example, for a range tombstone `[start, end)`, a `start` and an `end` `HeapItem` are inserted into the heap. When a `HeapItem` for range tombstone start key is popped from the minHeap, we know this range tombstone becomes "active" in the sense that, before the range tombstone's end key is popped from the minHeap, all the keys popped from this heap is covered by the range tombstone's internal key range `[start, end)`.

Another major change, *delete range sentinel key*, is made to `LevelIterator`. Before this PR, when all point keys in an SST file are iterated through in `MergingIterator`, a level iterator would advance to the next SST file in its level. In the case when an SST file has a range tombstone that covers keys beyond the SST file's last point key, advancing to the next SST file would lose this range tombstone. Consequently, `MergingIterator` could return keys that should have been deleted by some range tombstone. We prevent this by pretending that file boundaries in each SST file are sentinel keys. A `LevelIterator` now only advance the file iterator once the sentinel key is processed.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10449

Test Plan:
- Added many unit tests in db_range_del_test
- Stress test: `./db_stress --readpercent=5 --prefixpercent=19 --writepercent=20 -delpercent=10 --iterpercent=44 --delrangepercent=2`
- Additional iterator stress test is added to verify against iterators against expected state: https://github.com/facebook/rocksdb/issues/10538. This is based on ajkr's previous attempt https://github.com/facebook/rocksdb/pull/5506#issuecomment-506021913.

```
python3 ./tools/db_crashtest.py blackbox --simple --write_buffer_size=524288 --target_file_size_base=524288 --max_bytes_for_level_base=2097152 --compression_type=none --max_background_compactions=8 --value_size_mult=33 --max_key=5000000 --interval=10 --duration=7200 --delrangepercent=3 --delpercent=9 --iterpercent=25 --writepercent=60 --readpercent=3 --prefixpercent=0 --num_iterations=1000 --range_deletion_width=100 --verify_iterator_with_expected_state_one_in=1
```

- Performance benchmark: I used a similar setup as in the blog [post](http://rocksdb.org/blog/2018/11/21/delete-range.html) that introduced DeleteRange, "a database with 5 million data keys, and 10000 range tombstones (ignoring those dropped during compaction) that were written in regular intervals after 4.5 million data keys were written".  As expected, the performance with this PR depends on the range tombstone width.
```
# Setup:
TEST_TMPDIR=/dev/shm ./db_bench_main --benchmarks=fillrandom --writes=4500000 --num=5000000
TEST_TMPDIR=/dev/shm ./db_bench_main --benchmarks=overwrite --writes=500000 --num=5000000 --use_existing_db=true --writes_per_range_tombstone=50

# Scan entire DB
TEST_TMPDIR=/dev/shm ./db_bench_main --benchmarks=readseq[-X5] --use_existing_db=true --num=5000000 --disable_auto_compactions=true

# Short range scan (10 Next())
TEST_TMPDIR=/dev/shm/width-100/ ./db_bench_main --benchmarks=seekrandom[-X5] --use_existing_db=true --num=500000 --reads=100000 --seek_nexts=10 --disable_auto_compactions=true

# Long range scan(1000 Next())
TEST_TMPDIR=/dev/shm/width-100/ ./db_bench_main --benchmarks=seekrandom[-X5] --use_existing_db=true --num=500000 --reads=2500 --seek_nexts=1000 --disable_auto_compactions=true
```
Avg over of 10 runs (some slower tests had fews runs):

For the first column (tombstone), 0 means no range tombstone, 100-10000 means width of the 10k range tombstones, and 1 means there is a single range tombstone in the entire DB (width is 1000). The 1 tombstone case is to test regression when there's very few range tombstones in the DB, as no range tombstone is likely to take a different code path than with range tombstones.

- Scan entire DB

| tombstone width | Pre-PR ops/sec | Post-PR ops/sec | ±% |
| ------------- | ------------- | ------------- |  ------------- |
| 0 range tombstone    |2525600 (± 43564)    |2486917 (± 33698)    |-1.53%               |
| 100   |1853835 (± 24736)    |2073884 (± 32176)    |+11.87%              |
| 1000  |422415 (± 7466)      |1115801 (± 22781)    |+164.15%             |
| 10000 |22384 (± 227)        |227919 (± 6647)      |+918.22%             |
| 1 range tombstone      |2176540 (± 39050)    |2434954 (± 24563)    |+11.87%              |
- Short range scan

| tombstone width | Pre-PR ops/sec | Post-PR ops/sec | ±% |
| ------------- | ------------- | ------------- |  ------------- |
| 0  range tombstone   |35398 (± 533)        |35338 (± 569)        |-0.17%               |
| 100   |28276 (± 664)        |31684 (± 331)        |+12.05%              |
| 1000  |7637 (± 77)          |25422 (± 277)        |+232.88%             |
| 10000 |1367                 |28667                |+1997.07%            |
| 1 range tombstone      |32618 (± 581)        |32748 (± 506)        |+0.4%                |

- Long range scan

| tombstone width | Pre-PR ops/sec | Post-PR ops/sec | ±% |
| ------------- | ------------- | ------------- |  ------------- |
| 0 range tombstone     |2262 (± 33)          |2353 (± 20)          |+4.02%               |
| 100   |1696 (± 26)          |1926 (± 18)          |+13.56%              |
| 1000  |410 (± 6)            |1255 (± 29)          |+206.1%              |
| 10000 |25                   |414                  |+1556.0%             |
| 1 range tombstone   |1957 (± 30)          |2185 (± 44)          |+11.65%              |

- Microbench does not show significant regression: https://gist.github.com/cbi42/59f280f85a59b678e7e5d8561e693b61

Reviewed By: ajkr

Differential Revision: D38450331

Pulled By: cbi42

fbshipit-source-id: b5ef12e8d8c289ed2e163ccdf277f5039b511fca
2022-09-02 09:51:19 -07:00
Jay Zhuang dcb6a3be4e Add helper function to get debug type name (#10243)
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/10243

Reviewed By: riversand963

Differential Revision: D37370236

Pulled By: jay-zhuang

fbshipit-source-id: 6e7a6fadf45fdfb5afe97b3f6fe4acf1260d4a86
2022-07-15 14:42:00 -07:00
sdong c8b20d469d Make InternalKeyComparator not configurable (#10342)
Summary:
InternalKeyComparator is an internal class which is a simple wrapper of Comparator. https://github.com/facebook/rocksdb/pull/8336 made Comparator customizeable. As a side effect, internal key comparator was made configurable too. This introduces overhead to this simple wrapper. For example, every InternalKeyComparator will have an std::vector attached to it, which consumes memory and possible allocation overhead too.
We remove InternalKeyComparator from being customizable by making InternalKeyComparator not a subclass of Comparator.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10342

Test Plan: Run existing CI tests and make sure it doesn't fail

Reviewed By: riversand963

Differential Revision: D37771351

fbshipit-source-id: 917256ee04b2796ed82974549c734fb6c4d8ccee
2022-07-14 10:09:31 -07:00
sdong 769b156e65 Remove customized naming from InternalKeyComparator (#10343)
Summary:
InternalKeyComparator is a thin wrapper around user comparator. Storing a string for name is relatively expensive to this small wrapper for both CPU and memory usage. Try to remove it.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10343

Test Plan: Run existing tests

Reviewed By: ajkr

Differential Revision: D37772469

fbshipit-source-id: d2d106a8d022193058fd7f6b220108e3d94aca34
2022-07-12 13:30:35 -07:00
Levi Tamasi 8f59c41cc7 Add new value value type for wide-column entities (#10211)
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/10211

Test Plan: `make check`

Reviewed By: riversand963

Differential Revision: D37294067

Pulled By: ltamasi

fbshipit-source-id: 3b26f1964746ba4e3654579cb07cd975a29c7319
2022-06-20 18:04:08 -07:00
Hui Xiao d665afdbf3 Account memory of FileMetaData in global memory limit (#9924)
Summary:
**Context/Summary:**
As revealed by heap profiling, allocation of `FileMetaData` for [newly created file added to a Version](https://github.com/facebook/rocksdb/pull/9924/files#diff-a6aa385940793f95a2c5b39cc670bd440c4547fa54fd44622f756382d5e47e43R774) can consume significant heap memory. This PR is to account that toward our global memory limit based on block cache capacity.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/9924

Test Plan:
- Previous `make check` verified there are only 2 places where the memory of  the allocated `FileMetaData` can be released
- New unit test `TEST_P(ChargeFileMetadataTestWithParam, Basic)`
- db bench (CPU cost of `charge_file_metadata` in write and compact)
   - **write micros/op: -0.24%** : `TEST_TMPDIR=/dev/shm/testdb ./db_bench -benchmarks=fillseq -db=$TEST_TMPDIR -charge_file_metadata=1 (remove this option for pre-PR) -disable_auto_compactions=1 -write_buffer_size=100000 -num=4000000 | egrep 'fillseq'`
   - **compact micros/op -0.87%** : `TEST_TMPDIR=/dev/shm/testdb ./db_bench -benchmarks=fillseq -db=$TEST_TMPDIR -charge_file_metadata=1 -disable_auto_compactions=1 -write_buffer_size=100000 -num=4000000 -numdistinct=1000 && ./db_bench -benchmarks=compact -db=$TEST_TMPDIR -use_existing_db=1 -charge_file_metadata=1 -disable_auto_compactions=1 | egrep 'compact'`

table 1 - write

#-run | (pre-PR) avg micros/op | std micros/op | (post-PR)  micros/op | std micros/op | change (%)
-- | -- | -- | -- | -- | --
10 | 3.9711 | 0.264408 | 3.9914 | 0.254563 | 0.5111933721
20 | 3.83905 | 0.0664488 | 3.8251 | 0.0695456 | -0.3633711465
40 | 3.86625 | 0.136669 | 3.8867 | 0.143765 | 0.5289363078
80 | 3.87828 | 0.119007 | 3.86791 | 0.115674 | **-0.2673865734**
160 | 3.87677 | 0.162231 | 3.86739 | 0.16663 | **-0.2419539978**

table 2 - compact

#-run | (pre-PR) avg micros/op | std micros/op | (post-PR)  micros/op | std micros/op | change (%)
-- | -- | -- | -- | -- | --
10 | 2,399,650.00 | 96,375.80 | 2,359,537.00 | 53,243.60 | -1.67
20 | 2,410,480.00 | 89,988.00 | 2,433,580.00 | 91,121.20 | 0.96
40 | 2.41E+06 | 121811 | 2.39E+06 | 131525 | **-0.96**
80 | 2.40E+06 | 134503 | 2.39E+06 | 108799 | **-0.78**

- stress test: `python3 tools/db_crashtest.py blackbox --charge_file_metadata=1  --cache_size=1` killed as normal

Reviewed By: ajkr

Differential Revision: D36055583

Pulled By: hx235

fbshipit-source-id: b60eab94707103cb1322cf815f05810ef0232625
2022-06-14 13:06:40 -07:00
Peter Dillinger d3a3b02134 Fix bug with kHashSearch and changing prefix_extractor with SetOptions (#10128)
Summary:
When opening an SST file created using index_type=kHashSearch,
the *current* prefix_extractor would be saved, and used with hash index
if the *new current* prefix_extractor at query time is compatible with
the SST file. This is a problem if the prefix_extractor at SST open time
is not compatible but SetOptions later changes (back) to one that is
compatible.

This change fixes that by using the known compatible (or missing) prefix
extractor we save for use with prefix filtering. Detail: I have moved the
InternalKeySliceTransform wrapper to avoid some indirection and remove
unnecessary fields.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10128

Test Plan:
expanded unit test (using some logic from https://github.com/facebook/rocksdb/issues/10122) that fails
before fix and probably covers some other previously uncovered cases.

Reviewed By: siying

Differential Revision: D36955738

Pulled By: pdillinger

fbshipit-source-id: 0c78a6b0d24054ef2f3cb237bf010c1c5589fb10
2022-06-10 08:51:45 -07:00
sdong 49628c9a83 Use std::numeric_limits<> (#9954)
Summary:
Right now we still don't fully use std::numeric_limits but use a macro, mainly for supporting VS 2013. Right now we only support VS 2017 and up so it is not a problem. The code comment claims that MinGW still needs it. We don't have a CI running MinGW so it's hard to validate. since we now require C++17, it's hard to imagine MinGW would still build RocksDB but doesn't support std::numeric_limits<>.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/9954

Test Plan: See CI Runs.

Reviewed By: riversand963

Differential Revision: D36173954

fbshipit-source-id: a35a73af17cdcae20e258cdef57fcf29a50b49e0
2022-05-05 13:08:21 -07:00
slk 95305c44a1 Add OpenAndTrimHistory API to support trimming data with specified timestamp (#9410)
Summary:
As disscussed in (https://github.com/facebook/rocksdb/issues/9223), Here added a new API  named DB::OpenAndTrimHistory, this API will open DB and trim data to the timestamp specofied by **trim_ts** (The data with newer timestamp than specified trim bound will be removed). This API should only be used at a timestamp-enabled db instance recovery.

And this PR implemented a new iterator named HistoryTrimmingIterator to support trimming history with a new API named DB::OpenAndTrimHistory. HistoryTrimmingIterator wrapped around the underlying InternalITerator such that keys whose timestamps newer than **trim_ts** should not be returned to the compaction iterator while **trim_ts** is not null.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/9410

Reviewed By: ltamasi

Differential Revision: D34410207

Pulled By: riversand963

fbshipit-source-id: e54049dc234eccd673244c566b15df58df5a6236
2022-03-11 16:13:23 -08:00
Yanqin Jin 685044dff2 Remove timestamp from key in expected state (#9525)
Summary:
The keys as part of write batch read from trace file can contain trailing timestamps.
This PR removes them before calling `ExpectedState`.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/9525

Test Plan:
make check
make crash_test_with_ts

Reviewed By: ajkr

Differential Revision: D34082358

Pulled By: riversand963

fbshipit-source-id: 78c925659e2a19e4a8278fb4a8ddf5070e265c04
2022-02-09 09:50:54 -08:00
Yanqin Jin bd513fd075 Add commit marker with timestamp (#9266)
Summary:
Pull Request resolved: https://github.com/facebook/rocksdb/pull/9266

This diff adds a new tag `CommitWithTimestamp`. Currently, there is no API to trigger writing
this tag to WAL, thus it is unavailable to users.
This is an ongoing effort to add user-defined timestamp support to write-committed transactions.
This diff also indicates all column families that may potentially participate in the same
transaction must either disable timestamp or have the same timestamp format, since
`CommitWithTimestamp` tag is followed by a single byte-array denoting the commit
timestamp of the transaction. We will enforce this checking in a future diff. We keep this
diff small.

Reviewed By: ltamasi

Differential Revision: D31721350

fbshipit-source-id: e1450811443647feb6ca01adec4c8aaae270ffc6
2021-12-10 11:05:35 -08:00
slk 937fbcbddc Track per-SST user-defined timestamp information in MANIFEST (#9092)
Summary:
Track per-SST user-defined timestamp information in MANIFEST https://github.com/facebook/rocksdb/issues/8957

Rockdb has supported user-defined timestamp feature. Application can specify a timestamp
when writing each k-v pair. When data flush from memory to disk file called SST files, file
creation activity will commit to MANIFEST. This commit is for tracking timestamp info in the
MANIFEST for each file. The changes involved are as follows:
1) Track max/min timestamp in FileMetaData, and fix invoved codes.
2) Add NewFileCustomTag::kMinTimestamp and NewFileCustomTag::kMinTimestamp in
    NewFileCustomTag ( in the kNewFile4 part ), and support invoved codes such as
    VersionEdit Encode and Decode etc.
3) Add unit test code for VersionEdit EncodeDecodeNewFile4, and fix invoved test codes.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/9092

Reviewed By: ajkr, akankshamahajan15

Differential Revision: D32252323

Pulled By: riversand963

fbshipit-source-id: d2642898d6e3ad1fef0eb866b98045408bd4e162
2021-11-10 10:49:04 -08:00
mrambacher 13ae16c315 Cleanup includes in dbformat.h (#8930)
Summary:
This header file was including everything and the kitchen sink when it did not need to.  This resulted in many places including this header when they needed other pieces instead.

Cleaned up this header to only include what was needed and fixed up the remaining code to include what was now missing.

Hopefully, this sort of code hygiene cleanup will speed up the builds...

Pull Request resolved: https://github.com/facebook/rocksdb/pull/8930

Reviewed By: pdillinger

Differential Revision: D31142788

Pulled By: mrambacher

fbshipit-source-id: 6b45de3f300750c79f751f6227dece9cfd44085d
2021-09-29 04:04:40 -07:00
storagezhang 711881bc25 Fix some typos in comments (#8066)
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/8066

Reviewed By: jay-zhuang

Differential Revision: D27280799

Pulled By: mrambacher

fbshipit-source-id: 68f91f5af4ffe0a84be581961bf9366887f47702
2021-03-25 21:18:08 -07:00
Yanqin Jin 82b3888433 Enable backward iterator for keys with user-defined timestamp (#8035)
Summary:
This PR does the following:

- Enable backward iteration for keys with user-defined timestamp. Note that merge, single delete, range delete are not supported yet.
- Introduces a new helper API `Comparator::EqualWithoutTimestamp()`.
- Fix a typo in `SetTimestamp()`.
- Add/update unit tests

Run db_bench (built with DEBUG_LEVEL=0) to demonstrate that no overhead is introduced for CPU-intensive workloads with a lot of `Prev()`. Also provided results of iterating keys with timestamps.

1. Disable timestamp, run:
```
./db_bench -db=/dev/shm/rocksdb -disable_wal=1 -benchmarks=fillseq,seekrandom[-W1-X6] -reverse_iterator=1 -seek_nexts=5
```
Results:
> Baseline
> - seekrandom [AVG    6 runs] : 96115 ops/sec;   53.2 MB/sec
> - seekrandom [MEDIAN 6 runs] : 98075 ops/sec;   54.2 MB/sec
>
> This PR
> - seekrandom [AVG    6 runs] : 95521 ops/sec;   52.8 MB/sec
> - seekrandom [MEDIAN 6 runs] : 96338 ops/sec;   53.3 MB/sec

2. Enable timestamp, run:
```
./db_bench -user_timestamp_size=8  -db=/dev/shm/rocksdb -disable_wal=1 -benchmarks=fillseq,seekrandom[-W1-X6] -reverse_iterator=1 -seek_nexts=5
```
Result:
> Baseline: not supported
>
> This PR
> - seekrandom [AVG    6 runs] : 90514 ops/sec;   50.1 MB/sec
> - seekrandom [MEDIAN 6 runs] : 90834 ops/sec;   50.2 MB/sec

Pull Request resolved: https://github.com/facebook/rocksdb/pull/8035

Reviewed By: ltamasi

Differential Revision: D26926668

Pulled By: riversand963

fbshipit-source-id: 95330cc2242397c03e09d29e5417dfb0adc98ef5
2021-03-10 11:15:46 -08:00
Andrew Kryczka 78ee8564ad Integrity protection for live updates to WriteBatch (#7748)
Summary:
This PR adds the foundation classes for key-value integrity protection and the first use case: protecting live updates from the source buffers added to `WriteBatch` through the destination buffer in `MemTable`. The width of the protection info is not yet configurable -- only eight bytes per key is supported. This PR allows users to enable protection by constructing `WriteBatch` with `protection_bytes_per_key == 8`. It does not yet expose a way for users to get integrity protection via other write APIs (e.g., `Put()`, `Merge()`, `Delete()`, etc.).

The foundation classes (`ProtectionInfo.*`) embed the coverage info in their type, and provide `Protect.*()` and `Strip.*()` functions to navigate between types with different coverage. For making bytes per key configurable (for powers of two up to eight) in the future, these classes are templated on the unsigned integer type used to store the protection info. That integer contains the XOR'd result of hashes with independent seeds for all covered fields. For integer fields, the hash is computed on the raw unadjusted bytes, so the result is endian-dependent. The most significant bytes are truncated when the hash value (8 bytes) is wider than the protection integer.

When `WriteBatch` is constructed with `protection_bytes_per_key == 8`, we hold a `ProtectionInfoKVOTC` (i.e., one that covers key, value, optype aka `ValueType`, timestamp, and CF ID) for each entry added to the batch. The protection info is generated from the original buffers passed by the user, as well as the original metadata generated internally. When writing to memtable, each entry is transformed to a `ProtectionInfoKVOTS` (i.e., dropping coverage of CF ID and adding coverage of sequence number), since at that point we know the sequence number, and have already selected a memtable corresponding to a particular CF. This protection info is verified once the entry is encoded in the `MemTable` buffer.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/7748

Test Plan:
- an integration test to verify a wide variety of single-byte changes to the encoded `MemTable` buffer are caught
- add to stress/crash test to verify it works in variety of configs/operations without intentional corruption
- [deferred] unit tests for `ProtectionInfo.*` classes for edge cases like KV swap, `SliceParts` and `Slice` APIs are interchangeable, etc.

Reviewed By: pdillinger

Differential Revision: D25754492

Pulled By: ajkr

fbshipit-source-id: e481bac6c03c2ab268be41359730f1ceb9964866
2021-01-29 12:18:58 -08:00
Jay Zhuang 7fec715db4 Make CompactRange and GetApproximateSizes work with timestamp (#7684)
Summary:
Add timestamp to the `CompactRange()` and `GetApproximateSizes` range keys if needed.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/7684

Test Plan: make check

Reviewed By: riversand963

Differential Revision: D25015421

Pulled By: jay-zhuang

fbshipit-source-id: 51ca0756087eb053a3b11801e5c7ce1c6e2d38a9
2020-12-02 13:00:53 -08:00
Ramkumar Vadivelu 9a690a74e1 In ParseInternalKey(), include corrupt key info in Status (#7515)
Summary:
Fixes Issue https://github.com/facebook/rocksdb/issues/7497

When allow_data_in_errors db_options is set, log error key details in `ParseInternalKey()`

Have fixed most of the calls. Have few TODOs still pending - because have to make more deeper changes to pass in the allow_data_in_errors flag. Will do those in a separate PR later.

Tests:
- make check
- some of the existing tests that exercise the "internal key too small" condition are: dbformat_test, cuckoo_table_builder_test
- some of the existing tests that exercise the corrupted key path are: corruption_test, merge_helper_test, compaction_iterator_test

Example of new status returns:
- Key too small - `Corrupted Key: Internal Key too small. Size=5`
- Corrupt key with allow_data_in_errors option set to false: `Corrupted Key: '<redacted>' seq:3, type:3`
- Corrupt key with allow_data_in_errors option set to true: `Corrupted Key: '61' seq:3, type:3`

Pull Request resolved: https://github.com/facebook/rocksdb/pull/7515

Reviewed By: ajkr

Differential Revision: D24240264

Pulled By: ramvadiv

fbshipit-source-id: bc48f5d4475ac19d7713e16df37505b31aac42e7
2020-10-28 10:12:58 -07:00
Yanqin Jin 6595267980 Allow compaction iterator to perform garbage collection (#7556)
Summary:
Add a threshold timestamp, full_history_ts_low_ of type `std::string*` to
`CompactionIterator`, so that RocksDB can also perform garbage collection during
compaction.
* If full_history_ts_low_ is nullptr, then compaction iterator does not perform
  GC, preserving all timestamp history for all keys. Compaction iterator will
treat user key with different timestamps as different user keys.
* If full_history_ts_low_ is not nullptr, then compaction iterator performs
  GC. GC will look at keys older than `*full_history_ts_low_` and determine their
  eligibility based on factors including snapshots.

Current rules of GC:
 * If an internal key is in the same snapshot as a previous counterpart
    with the same user key, and this key is eligible for GC, and the key is
    not single-delete or merge operand, then this key can be dropped. Note
    that the previous internal key cannot be a merge operand either.
 * If a tombstone is the most recent one in the earliest snapshot and it
    is eligible for GC, and keyNotExistsBeyondLevel() is true, then this
    tombstone can be dropped.
 * If a tombstone is the most recent one in a snapshot and it is eligible
    for GC, and the compaction is at bottommost level, then all other older
    internal keys of the same user key must also be eligible for GC, thus
    can be dropped
* Single-delete, delete-range and merge are not currently supported.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/7556

Test Plan: make check

Reviewed By: ltamasi

Differential Revision: D24507728

Pulled By: riversand963

fbshipit-source-id: 3c09c7301f41eed76dfcf4d1527e68cf6e0a8bb3
2020-10-23 22:59:46 -07:00
sdong 7508175558 Introduce options.check_flush_compaction_key_order (#7467)
Summary:
Introduce an new option options.check_flush_compaction_key_order, by default set to true, which checks key order of flush and compaction, and fail the operation if the order is violated.
Also did minor refactor hash checking code, which consolidates the hashing logic to a vlidation class, where the key ordering logic is added.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/7467

Test Plan: Add unit tests to validate the check can catch reordering in flush and compaction, and can be properly disabled.

Reviewed By: riversand963

Differential Revision: D24010683

fbshipit-source-id: 8dd6292d2cda8006054e9ded7cfa4bf405f0527c
2020-10-01 10:10:26 -07:00
Ramkumar Vadivelu e04a50923d Change ParseInternalKey() to return Status instead of bool (#7457)
Summary:
Fixes https://github.com/facebook/rocksdb/issues/7430

Change ParseInternalKey() to return Status instead of bool.

db_bench (seekrandom) based before/after results with value size of 100 bytes and 16 bytes can be found at (tests ran on an udb server):
https://www.dropbox.com/s/47bwamdy5ozngph/PIK_ret_Status_results.xlsx?dl=0

![db_bench_results](https://user-images.githubusercontent.com/62277872/94642825-2a21a800-029a-11eb-88f2-124136c83fd3.png)

Pull Request resolved: https://github.com/facebook/rocksdb/pull/7457

Reviewed By: ajkr

Differential Revision: D24002433

Pulled By: ramvadiv

fbshipit-source-id: ac253ecf577a29044c47c3fe254a01e71404c44c
2020-09-30 19:16:47 -07:00
Andrew Kryczka dd29ad4223 Separate internal and user key comparators in BlockIter (#6944)
Summary:
Replace `BlockIter::comparator_` and `IndexBlockIter::user_comparator_wrapper_` with a concrete `UserComparatorWrapper` and `InternalKeyComparator`. The motivation for this change was the inconvenience of not knowing the concrete type of `BlockIter::comparator_`, which prevented calling specialized internal key comparison functions to optimize comparison of keys with global seqno applied.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/6944

Test Plan:
benchmark setup -- single file DBs, in-memory, no compression. "normal_db"
created by regular flush; "ingestion_db" created by ingesting a file. Both
DBs have same contents.

```
$ TEST_TMPDIR=/dev/shm/normal_db/ ./db_bench -benchmarks=fillrandom,compact -write_buffer_size=10485760000 -disable_auto_compactions=true -compression_type=none -num=1000000
$ ./ldb write_extern_sst ./tmp.sst --db=/dev/shm/ingestion_db/dbbench/ --compression_type=no --hex --create_if_missing < <(./sst_dump --command=scan --output_hex --file=/dev/shm/normal_db/dbbench/000007.sst | awk 'began {print "0x" substr($1, 2, length($1) - 2), "==>", "0x" $5} ; /^Sst file format: block-based/ {began=1}')
$ ./ldb ingest_extern_sst ./tmp.sst --db=/dev/shm/ingestion_db/dbbench/
```

benchmark run command:

```
$ TEST_TMPDIR=/dev/shm/$DB/ ./db_bench -benchmarks=seekrandom -seek_nexts=$SEEK_NEXT -use_existing_db=true -cache_index_and_filter_blocks=false -num=1000000 -cache_size=0 -threads=1 -reads=200000000 -mmap_read=1 -verify_checksum=false
```

results: perf improved marginally for ingestion_db and did not change significantly for normal_db:

SEEK_NEXT | DB | code | ops/sec | % change
-- | -- | -- | -- | --
0 | normal_db | master | 350880 |  
0 | normal_db | PR6944 | 351040 | 0.0
0 | ingestion_db | master | 343255 |  
0 | ingestion_db | PR6944 | 349424 | 1.8
10 | normal_db | master | 218711 |  
10 | normal_db | PR6944 | 217892 | -0.4
10 | ingestion_db | master | 220334 |  
10 | ingestion_db | PR6944 | 226437 | 2.8

Reviewed By: pdillinger

Differential Revision: D21924676

Pulled By: ajkr

fbshipit-source-id: ea4288a2eefa8112eb6c651a671c1de18c12e538
2020-07-07 17:26:16 -07:00
Yanqin Jin 961c7590d6 Add timestamp to delete (#6253)
Summary:
Preliminary user-timestamp support for delete.

If ["a", ts=100] exists, you can delete it by calling `DB::Delete(write_options, key)` in which `write_options.timestamp` points to a `ts` higher than 100.

Implementation
A new ValueType, i.e. `kTypeDeletionWithTimestamp` is added for deletion marker with timestamp.
The reason for a separate `kTypeDeletionWithTimestamp`: RocksDB may drop tombstones (keys with kTypeDeletion) when compacting them to the bottom level. This is OK and useful if timestamp is disabled. When timestamp is enabled, should we still reuse `kTypeDeletion`, we may drop the tombstone with a more recent timestamp, causing deleted keys to re-appear.

Test plan (dev server)
```
make check
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6253

Reviewed By: ltamasi

Differential Revision: D20995328

Pulled By: riversand963

fbshipit-source-id: a9e5c22968ad76f98e3dc6ee0151265a3f0df619
2020-05-28 10:40:03 -07:00
Yanqin Jin d93812c9ae Iterator with timestamp (#6255)
Summary:
Preliminary support for iterator with user timestamp. Current implementation does not consider merge operator and reverse iterator. Auto compaction is also disabled in unit tests.

Create an iterator with timestamp.
```
...
read_opts.timestamp = &ts;
auto* iter = db->NewIterator(read_opts);
// target is key without timestamp.
for (iter->Seek(target); iter->Valid(); iter->Next()) {}
for (iter->SeekToFirst(); iter->Valid(); iter->Next()) {}
delete iter;
read_opts.timestamp = &ts1;
// lower_bound and upper_bound are without timestamp.
read_opts.iterate_lower_bound = &lower_bound;
read_opts.iterate_upper_bound = &upper_bound;
auto* iter1 = db->NewIterator(read_opts);
// Do Seek or SeekToFirst()
delete iter1;
```

Test plan (dev server)
```
$make check
```

Simple benchmarking (dev server)
1. The overhead introduced by this PR even when timestamp is disabled.
key size: 16 bytes
value size: 100 bytes
Entries: 1000000
Data reside in main memory, and try to stress iterator.
Repeated three times on master and this PR.
- Seek without next
```
./db_bench -db=/dev/shm/rocksdbtest-1000 -benchmarks=fillseq,seekrandom -enable_pipelined_write=false -disable_wal=true -format_version=3
```
master: 159047.0 ops/sec
this PR: 158922.3 ops/sec (2% drop in throughput)
- Seek and next 10 times
```
./db_bench -db=/dev/shm/rocksdbtest-1000 -benchmarks=fillseq,seekrandom -enable_pipelined_write=false -disable_wal=true -format_version=3 -seek_nexts=10
```
master: 109539.3 ops/sec
this PR: 107519.7 ops/sec (2% drop in throughput)
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6255

Differential Revision: D19438227

Pulled By: riversand963

fbshipit-source-id: b66b4979486f8474619f4aa6bdd88598870b0746
2020-03-06 16:24:27 -08:00
Huisheng Liu 904a60ff63 return timestamp from get (#6409)
Summary:
Added new Get() methods that return timestamp. Dummy implementation is given so that classes derived from DB don't need to be touched to provide their implementation. MultiGet is not included.

ReadRandom perf test (10 minutes) on the same development machine ram drive with the same DB data shows no regression (within marge of error). The test is adapted from https://github.com/facebook/rocksdb/wiki/RocksDB-In-Memory-Workload-Performance-Benchmarks.
    base line (commit 72ee067b9):
        101.712 micros/op 314602 ops/sec;   36.0 MB/s (5658999 of 5658999 found)
    This PR:
        100.288 micros/op 319071 ops/sec;   36.5 MB/s (5674999 of 5674999 found)

./db_bench --db=r:\rocksdb.github --num_levels=6 --key_size=20 --prefix_size=20 --keys_per_prefix=0 --value_size=100 --cache_size=2147483648 --cache_numshardbits=6 --compression_type=none --compression_ratio=1 --min_level_to_compress=-1 --disable_seek_compaction=1 --hard_rate_limit=2 --write_buffer_size=134217728 --max_write_buffer_number=2 --level0_file_num_compaction_trigger=8 --target_file_size_base=134217728 --max_bytes_for_level_base=1073741824 --disable_wal=0 --wal_dir=r:\rocksdb.github\WAL_LOG --sync=0 --verify_checksum=1 --delete_obsolete_files_period_micros=314572800 --max_background_compactions=4 --max_background_flushes=0 --level0_slowdown_writes_trigger=16 --level0_stop_writes_trigger=24 --statistics=0 --stats_per_interval=0 --stats_interval=1048576 --histogram=0 --use_plain_table=1 --open_files=-1 --mmap_read=1 --mmap_write=0 --memtablerep=prefix_hash --bloom_bits=10 --bloom_locality=1 --duration=600 --benchmarks=readrandom --use_existing_db=1 --num=25000000 --threads=32
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6409

Differential Revision: D20200086

Pulled By: riversand963

fbshipit-source-id: 490edd74d924f62bd8ae9c29c2a6bbbb8410ca50
2020-03-02 16:01:00 -08:00
sdong fdf882ded2 Replace namespace name "rocksdb" with ROCKSDB_NAMESPACE (#6433)
Summary:
When dynamically linking two binaries together, different builds of RocksDB from two sources might cause errors. To provide a tool for user to solve the problem, the RocksDB namespace is changed to a flag which can be overridden in build time.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/6433

Test Plan: Build release, all and jtest. Try to build with ROCKSDB_NAMESPACE with another flag.

Differential Revision: D19977691

fbshipit-source-id: aa7f2d0972e1c31d75339ac48478f34f6cfcfb3e
2020-02-20 12:09:57 -08:00
Shylock Hg 9eb3e1f77d Use delete to disable automatic generated methods. (#5009)
Summary:
Use delete to disable automatic generated methods instead of private, and put the constructor together for more clear.This modification cause the unused field warning, so add unused attribute to disable this warning.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5009

Differential Revision: D17288733

fbshipit-source-id: 8a767ce096f185f1db01bd28fc88fef1cdd921f3
2019-09-11 18:09:00 -07:00
Yanqin Jin ae152ee666 Avoid user key copying for Get/Put/Write with user-timestamp (#5502)
Summary:
In previous https://github.com/facebook/rocksdb/issues/5079, we added user-specified timestamp to `DB::Get()` and `DB::Put()`. Limitation is that these two functions may cause extra memory allocation and key copy. The reason is that `WriteBatch` does not allocate extra memory for timestamps because it is not aware of timestamp size, and we did not provide an API to assign/update timestamp of each key within a `WriteBatch`.
We address these issues in this PR by doing the following.
1. Add a `timestamp_size_` to `WriteBatch` so that `WriteBatch` can take timestamps into account when calling `WriteBatch::Put`, `WriteBatch::Delete`, etc.
2. Add APIs `WriteBatch::AssignTimestamp` and `WriteBatch::AssignTimestamps` so that application can assign/update timestamps for each key in a `WriteBatch`.
3. Avoid key copy in `GetImpl` by adding new constructor to `LookupKey`.

Test plan (on devserver):
```
$make clean && COMPILE_WITH_ASAN=1 make -j32 all
$./db_basic_test --gtest_filter=Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/*
$make check
```
If the API extension looks good, I will add more unit tests.

Some simple benchmark using db_bench.
```
$rm -rf /dev/shm/dbbench/* && TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillseq,readrandom -num=1000000
$rm -rf /dev/shm/dbbench/* && TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillrandom -num=1000000 -disable_wal=true
```
Master is at a78503bd6c.
```
|        | readrandom | fillrandom |
| master | 15.53 MB/s | 25.97 MB/s |
| PR5502 | 16.70 MB/s | 25.80 MB/s |
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5502

Differential Revision: D16340894

Pulled By: riversand963

fbshipit-source-id: 51132cf792be07d1efc3ac33f5768c4ee2608bb8
2019-07-25 15:27:39 -07:00
Yanqin Jin 340ed4fac7 Add support for timestamp in Get/Put (#5079)
Summary:
It's useful to be able to (optionally) associate key-value pairs with user-provided timestamps. This PR is an early effort towards this goal and continues the work of facebook#4942. A suite of new unit tests exist in DBBasicTestWithTimestampWithParam. Support for timestamp requires the user to provide timestamp as a slice in `ReadOptions` and `WriteOptions`. All timestamps of the same database must share the same length, format, etc. The format of the timestamp is the same throughout the same database, and the user is responsible for providing a comparator function (Comparator) to order the <key, timestamp> tuples. Once created, the format and length of the timestamp cannot change (at least for now).

Test plan (on devserver):
```
$COMPILE_WITH_ASAN=1 make -j32 all
$./db_basic_test --gtest_filter=Timestamp/DBBasicTestWithTimestampWithParam.PutAndGet/*
$make check
```
All tests must pass.

We also run the following db_bench tests to verify whether there is regression on Get/Put while timestamp is not enabled.
```
$TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillseq,readrandom -num=1000000
$TEST_TMPDIR=/dev/shm ./db_bench -benchmarks=fillrandom -num=1000000
```
Repeat for 6 times for both versions.

Results are as follows:
```
|        | readrandom | fillrandom |
| master | 16.77 MB/s | 47.05 MB/s |
| PR5079 | 16.44 MB/s | 47.03 MB/s |
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5079

Differential Revision: D15132946

Pulled By: riversand963

fbshipit-source-id: 833a0d657eac21182f0f206c910a6438154c742c
2019-06-05 23:10:47 -07:00
Siying Dong 000b9ec217 Move some logging related files to logging/ (#5387)
Summary:
Many logging related source files are under util/. It will be more structured if they are together.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/5387

Differential Revision: D15579036

Pulled By: siying

fbshipit-source-id: 3850134ed50b8c0bb40a0c8ae1f184fa4081303f
2019-05-31 17:23:59 -07:00