Commit graph

288 commits

Author SHA1 Message Date
Changyu Bi 6c5ec92070 Set correct temperature for range tombstone only file in penultimate level (#10972)
Summary:
before this PR, if there is a range tombstone-only file generated in penultimate level, it is marked the `last_level_temperature`. This PR fixes this issue.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10972

Test Plan: added unit test for this scenario.

Reviewed By: ajkr

Differential Revision: D41449215

Pulled By: cbi42

fbshipit-source-id: 1e06b5ae3bc0183db2991a45965a9807a7e8be0c
2022-11-21 17:08:50 -08:00
Andrew Kryczka 097f9f4425 Fix CompactionIterator flag for penultimate level output (#10967)
Summary:
We were not resetting it in non-debug mode so it could be true once and then stay true for future keys where it should be false. This PR adds the reset logic.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10967

Test Plan:
- built `db_bench` with DEBUG_LEVEL=0
- ran benchmark: `TEST_TMPDIR=/dev/shm/prefix ./db_bench -benchmarks=fillrandom -compaction_style=1 -preserve_internal_time_seconds=100 -preclude_last_level_data_seconds=10 -write_buffer_size=1048576 -target_file_size_base=1048576 -subcompactions=8 -duration=120`
- compared "output_to_penultimate_level: X bytes + last: Y bytes" lines in LOG output
  - Before this fix, Y was always zero
  - After this fix, Y gradually increased throughout the benchmark

Reviewed By: riversand963

Differential Revision: D41417726

Pulled By: ajkr

fbshipit-source-id: ace1e9a289e751a5b0c2fbaa8addd4eda5525329
2022-11-21 16:14:03 -08:00
Yanqin Jin 7d26e4c5a3 Basic Support for Merge with user-defined timestamp (#10819)
Summary:
This PR implements the originally disabled `Merge()` APIs when user-defined timestamp is enabled.

Simplest usage:
```cpp
// assume string append merge op is used with '.' as delimiter.
// ts1 < ts2
db->Put(WriteOptions(), "key", ts1, "v0");
db->Merge(WriteOptions(), "key", ts2, "1");
ReadOptions ro;
ro.timestamp = &ts2;
db->Get(ro, "key", &value);
ASSERT_EQ("v0.1", value);
```

Some code comments are added for clarity.

Note: support for timestamp in `DB::GetMergeOperands()` will be done in a follow-up PR.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10819

Test Plan: make check

Reviewed By: ltamasi

Differential Revision: D40603195

Pulled By: riversand963

fbshipit-source-id: f96d6f183258f3392d80377025529f7660503013
2022-10-31 22:28:58 -07:00
Jay Zhuang b36ec37a4b clang-format for db/compaction (#10882)
Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/10882

Reviewed By: riversand963

Differential Revision: D40724867

Pulled By: jay-zhuang

fbshipit-source-id: 7f387724f8cd07d8d2b90566a515a4e9078d21f1
2022-10-26 12:35:12 -07:00
Hui Xiao fc74abb436 Fix FIFO causing overlapping seqnos in L0 files due to overlapped seqnos between ingested files and memtable's (#10777)
Summary:
**Context:**
Same as https://github.com/facebook/rocksdb/pull/5958#issue-511150930 but apply the fix to FIFO Compaction case
Repro:
```
COERCE_CONTEXT_SWICH=1 make -j56 db_stress

./db_stress --acquire_snapshot_one_in=0 --adaptive_readahead=0 --allow_data_in_errors=True --async_io=1 --avoid_flush_during_recovery=0 --avoid_unnecessary_blocking_io=0 --backup_max_size=104857600 --backup_one_in=0 --batch_protection_bytes_per_key=0 --block_size=16384 --bloom_bits=18 --bottommost_compression_type=disable --bytes_per_sync=262144 --cache_index_and_filter_blocks=0 --cache_size=8388608 --cache_type=lru_cache --charge_compression_dictionary_building_buffer=0 --charge_file_metadata=1 --charge_filter_construction=1 --charge_table_reader=1 --checkpoint_one_in=0 --checksum_type=kCRC32c --clear_column_family_one_in=0 --column_families=1 --compact_files_one_in=0 --compact_range_one_in=1000 --compaction_pri=3 --open_files=-1 --compaction_style=2 --fifo_allow_compaction=1 --compaction_ttl=0 --compression_max_dict_buffer_bytes=8388607 --compression_max_dict_bytes=16384 --compression_parallel_threads=1 --compression_type=zlib --compression_use_zstd_dict_trainer=1 --compression_zstd_max_train_bytes=0 --continuous_verification_interval=0 --data_block_index_type=0 --db=/dev/shm/rocksdb_test0/rocksdb_crashtest_whitebox --db_write_buffer_size=8388608 --delpercent=4 --delrangepercent=1 --destroy_db_initially=1 --detect_filter_construct_corruption=0 --disable_wal=0 --enable_compaction_filter=0 --enable_pipelined_write=1 --fail_if_options_file_error=1 --file_checksum_impl=none --flush_one_in=1000 --format_version=5 --get_current_wal_file_one_in=0 --get_live_files_one_in=0 --get_property_one_in=0 --get_sorted_wal_files_one_in=0 --index_block_restart_interval=15 --index_type=3 --ingest_external_file_one_in=100 --initial_auto_readahead_size=0 --iterpercent=10 --key_len_percent_dist=1,30,69 --level_compaction_dynamic_level_bytes=True --log2_keys_per_lock=10 --long_running_snapshots=0 --mark_for_compaction_one_file_in=10 --max_auto_readahead_size=16384 --max_background_compactions=20 --max_bytes_for_level_base=10485760 --max_key=100000 --max_key_len=3 --max_manifest_file_size=1073741824 --max_write_batch_group_size_bytes=1048576 --max_write_buffer_number=3 --max_write_buffer_size_to_maintain=4194304 --memtable_prefix_bloom_size_ratio=0.5 --memtable_protection_bytes_per_key=1 --memtable_whole_key_filtering=1 --memtablerep=skip_list --mmap_read=1 --mock_direct_io=False --nooverwritepercent=1 --num_file_reads_for_auto_readahead=0 --num_levels=1 --open_metadata_write_fault_one_in=0 --open_read_fault_one_in=32 --open_write_fault_one_in=0 --ops_per_thread=200000 --optimize_filters_for_memory=0 --paranoid_file_checks=1 --partition_filters=0 --partition_pinning=1 --pause_background_one_in=0 --periodic_compaction_seconds=0 --prefix_size=8 --prefixpercent=5 --prepopulate_block_cache=0 --progress_reports=0 --read_fault_one_in=0 --readahead_size=16384 --readpercent=45 --recycle_log_file_num=1 --reopen=20 --ribbon_starting_level=999 --snapshot_hold_ops=1000 --sst_file_manager_bytes_per_sec=0 --sst_file_manager_bytes_per_truncate=0 --subcompactions=2 --sync=0 --sync_fault_injection=0 --target_file_size_base=524288 --target_file_size_multiplier=2 --test_batches_snapshots=0 --top_level_index_pinning=3 --unpartitioned_pinning=0 --use_direct_io_for_flush_and_compaction=0 --use_direct_reads=0 --use_full_merge_v1=1 --use_merge=0 --use_multiget=1 --user_timestamp_size=0 --value_size_mult=32 --verify_checksum=1 --verify_checksum_one_in=0 --verify_db_one_in=1000 --verify_sst_unique_id_in_manifest=1 --wal_bytes_per_sync=0 --wal_compression=zstd --write_buffer_size=524288 --write_dbid_to_manifest=0 --writepercent=35

put or merge error: Corruption: force_consistency_checks(DEBUG): VersionBuilder: L0 file https://github.com/facebook/rocksdb/issues/479 with seqno 23711 29070 vs. file https://github.com/facebook/rocksdb/issues/482 with seqno 27138 29049
```

**Summary:**
FIFO only does intra-L0 compaction in the following four cases. For other cases, FIFO drops data instead of compacting on data, which is irrelevant to the overlapping seqno issue we are solving.
-  [FIFOCompactionPicker::PickSizeCompaction](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker_fifo.cc#L155) when `total size < compaction_options_fifo.max_table_files_size` and `compaction_options_fifo.allow_compaction == true`
   - For this path, we simply reuse the fix in `FindIntraL0Compaction` https://github.com/facebook/rocksdb/pull/5958/files#diff-c261f77d6dd2134333c4a955c311cf4a196a08d3c2bb6ce24fd6801407877c89R56
   - This path was not stress-tested at all. Therefore we covered `fifo.allow_compaction` in stress test to surface the overlapping seqno issue we are fixing here.
- [FIFOCompactionPicker::PickCompactionToWarm](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker_fifo.cc#L313) when `compaction_options_fifo.age_for_warm > 0`
  - For this path, we simply replicate the idea in https://github.com/facebook/rocksdb/pull/5958#issue-511150930 and skip files of largest seqno greater than `earliest_mem_seqno`
  - This path was not stress-tested at all. However covering `age_for_warm` option worths a separate PR to deal with db stress compatibility. Therefore we manually tested this path for this PR
- [FIFOCompactionPicker::CompactRange](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker_fifo.cc#L365) that ends up picking one of the above two compactions
- [CompactionPicker::CompactFiles](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker.cc#L378)
    - Since `SanitizeCompactionInputFiles()` will be called [before](https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_picker.h#L111-L113) `CompactionPicker::CompactFiles` , we simply replicate the idea in https://github.com/facebook/rocksdb/pull/5958#issue-511150930  in `SanitizeCompactionInputFiles()`. To simplify implementation, we return `Stats::Abort()` on encountering seqno-overlapped file when doing compaction to L0 instead of skipping the file and proceed with the compaction.

Some additional clean-up included in this PR:
- Renamed `earliest_memtable_seqno` to `earliest_mem_seqno` for consistent naming
- Added comment about `earliest_memtable_seqno` in related APIs
- Made parameter `earliest_memtable_seqno` constant and required

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10777

Test Plan:
- make check
- New unit test `TEST_P(DBCompactionTestFIFOCheckConsistencyWithParam, FlushAfterIntraL0CompactionWithIngestedFile)`corresponding to the above 4 cases, which will fail accordingly without the fix
- Regular CI stress run on this PR + stress test with aggressive value https://github.com/facebook/rocksdb/pull/10761  and on FIFO compaction only

Reviewed By: ajkr

Differential Revision: D40090485

Pulled By: hx235

fbshipit-source-id: 52624186952ee7109117788741aeeac86b624a4f
2022-10-25 10:39:58 -07:00
Jay Zhuang f726d29a82 Allow penultimate level output for the last level only compaction (#10822)
Summary:
Allow the last level only compaction able to output result to penultimate level if the penultimate level is empty. Which will also block the other compaction output to the penultimate level.
(it includes the PR https://github.com/facebook/rocksdb/issues/10829)

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10822

Reviewed By: siying

Differential Revision: D40389180

Pulled By: jay-zhuang

fbshipit-source-id: 4e5dcdce307795b5e07b5dd1fa29dd75bb093bad
2022-10-22 08:57:38 -07:00
Changyu Bi 333abe9c55 Ignore max_compaction_bytes for compaction input that are within output key-range (#10835)
Summary:
When picking compaction input files, we sometimes stop picking a file that is fully included in the output key-range due to hitting max_compaction_bytes. Including these input files can potentially reduce WA at the expense of larger compactions. Larger compaction should be fine as files from input level are usually 10X smaller than files from output level. This PR adds a mutable CF option `ignore_max_compaction_bytes_for_input` that is enabled by default. We can remove this option once we are sure it is safe.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10835

Test Plan:
- CI, a unit test on max_compaction_bytes fails before turning this flag off.
- Benchmark does not show much difference in WA: `./db_bench --benchmarks=fillrandom,waitforcompaction,stats,levelstats -max_background_jobs=12 -num=2000000000 -target_file_size_base=33554432 --write_buffer_size=33554432`
```
main:
** Compaction Stats [default] **
Level    Files   Size     Score Read(GB)  Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
  L0      3/0   91.59 MB   0.8     70.9     0.0     70.9     200.8    129.9       0.0   1.5     25.2     71.2   2886.55           2463.45      9725    0.297   1093M   254K       0.0       0.0
  L1      9/0   248.03 MB   1.0    392.0   129.8    262.2     391.7    129.5       0.0   3.0     69.0     68.9   5821.71           5536.90       804    7.241   6029M  5814K       0.0       0.0
  L2     87/0    2.50 GB   1.0    537.0   128.5    408.5     533.8    125.2       0.7   4.2     69.5     69.1   7912.24           7323.70      4417    1.791   8299M    36M       0.0       0.0
  L3    836/0   24.99 GB   1.0    616.9   118.3    498.7     594.5     95.8       5.2   5.0     66.9     64.5   9442.38           8490.28      4204    2.246   9749M   306M       0.0       0.0
  L4   2355/0   62.95 GB   0.3     67.3    37.1     30.2      54.2     24.0      38.9   1.5     72.2     58.2    954.37            821.18       917    1.041   1076M   173M       0.0       0.0
 Sum   3290/0   90.77 GB   0.0   1684.2   413.7   1270.5    1775.0    504.5      44.9  13.7     63.8     67.3  27017.25          24635.52     20067    1.346     26G   522M       0.0       0.0

Cumulative compaction: 1774.96 GB write, 154.29 MB/s write, 1684.19 GB read, 146.40 MB/s read, 27017.3 seconds

This PR:
** Compaction Stats [default] **
Level    Files   Size     Score Read(GB)  Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
  L0      3/0   45.71 MB   0.8     72.9     0.0     72.9     202.8    129.9       0.0   1.6     25.4     70.7   2938.16           2510.36      9741    0.302   1124M   265K       0.0       0.0
  L1      8/0   234.54 MB   0.9    384.5   129.8    254.7     384.2    129.6       0.0   3.0     69.0     68.9   5708.08           5424.43       791    7.216   5913M  5753K       0.0       0.0
  L2     84/0    2.47 GB   1.0    543.1   128.6    414.5     539.9    125.4       0.7   4.2     69.6     69.2   7989.31           7403.13      4418    1.808   8393M    36M       0.0       0.0
  L3    839/0   24.96 GB   1.0    615.6   118.4    497.2     593.2     96.0       5.1   5.0     66.6     64.1   9471.23           8489.31      4193    2.259   9726M   306M       0.0       0.0
  L4   2360/0   63.04 GB   0.3     67.6    37.3     30.3      54.4     24.1      38.9   1.5     71.5     57.6    967.30            827.99       907    1.066   1080M   173M       0.0       0.0
 Sum   3294/0   90.75 GB   0.0   1683.8   414.2   1269.6    1774.5    504.9      44.8  13.7     63.7     67.1  27074.08          24655.22     20050    1.350     26G   522M       0.0       0.0

Cumulative compaction: 1774.52 GB write, 157.09 MB/s write, 1683.77 GB read, 149.06 MB/s read, 27074.1 seconds
```

Reviewed By: ajkr

Differential Revision: D40518319

Pulled By: cbi42

fbshipit-source-id: f4ea614bc0ebefe007ffaf05bb9aec9a8ca25b60
2022-10-21 10:22:41 -07:00
Jay Zhuang 1663f77d2a Fix no internal time recorded for small preclude_last_level (#10829)
Summary:
When the `preclude_last_level_data_seconds` or
`preserve_internal_time_seconds` is smaller than 100 (seconds), no seqno->time information was recorded.
Also make sure all data will be compacted to the last level even if there's no write to record the time information.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10829

Test Plan: added unittest

Reviewed By: siying

Differential Revision: D40443934

Pulled By: jay-zhuang

fbshipit-source-id: 2ecf1361daf9f3e5c3385aee6dc924fa59e2813a
2022-10-20 17:11:38 -07:00
Yueh-Hsuan Chiang e267909ecf Enable a multi-level db to smoothly migrate to FIFO via DB::Open (#10348)
Summary:
FIFO compaction can theoretically open a DB with any compaction style.
However, the current code only allows FIFO compaction to open a DB with
a single level.

This PR relaxes the limitation of FIFO compaction and allows it to open a
DB with multiple levels.  Below is the read / write / compaction behavior:

* The read behavior is untouched, and it works like a regular rocksdb instance.
* The write behavior is untouched as well.  When a FIFO compacted DB
is opened with multiple levels, all new files will still be in level 0, and no files
will be moved to a different level.
* Compaction logic is extended.  It will first identify the bottom-most non-empty level.
Then, it will delete the oldest file in that level.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10348

Test Plan:
Added a new test to verify the migration from level to FIFO where the db has multiple levels.
Extended existing test cases in db_test and db_basic_test to also verify
all entries of a key after reopening the DB with FIFO compaction.

Reviewed By: jay-zhuang

Differential Revision: D40233744

fbshipit-source-id: 6cc011d6c3467e6bfb9b6a4054b87619e69815e1
2022-10-18 14:38:13 -07:00
Peter Dillinger e466173d5c Print stack traces on frozen tests in CI (#10828)
Summary:
Instead of existing calls to ps from gnu_parallel, call a new wrapper that does ps, looks for unit test like processes, and uses pstack or gdb to print thread stack traces. Also, using `ps -wwf` instead of `ps -wf` ensures output is not cut off.

For security, CircleCI runs with security restrictions on ptrace (/proc/sys/kernel/yama/ptrace_scope = 1), and this change adds a work-around to `InstallStackTraceHandler()` (only used by testing tools) to allow any process from the same user to debug it. (I've also touched >100 files to ensure all the unit tests call this function.)

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10828

Test Plan: local manual + temporary infinite loop in a unit test to observe in CircleCI

Reviewed By: hx235

Differential Revision: D40447634

Pulled By: pdillinger

fbshipit-source-id: 718a4c4a5b54fa0f9af2d01a446162b45e5e84e1
2022-10-18 00:35:35 -07:00
Jay Zhuang 5a5f21c489 Allow the last level data moving up to penultimate level (#10782)
Summary:
Lock the penultimate level for the whole compaction inputs range, so any
key in that compaction is safe to move up from the last level to
penultimate level.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10782

Reviewed By: siying

Differential Revision: D40231540

Pulled By: siying

fbshipit-source-id: ca115cc8b4018b35d797329fa85a19b06cc8c13e
2022-10-10 22:50:34 -07:00
Jay Zhuang c401f285c3 Add option preserve_internal_time_seconds to preserve the time info (#10747)
Summary:
Add option `preserve_internal_time_seconds` to preserve the internal
time information.
It's mostly for the migration of the existing data to tiered storage (
`preclude_last_level_data_seconds`). When the tiering feature is just
enabled, the existing data won't have the time information to decide if
it's hot or cold. Enabling this feature will start collect and preserve
the time information for the new data.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10747

Reviewed By: siying

Differential Revision: D39910141

Pulled By: siying

fbshipit-source-id: 25c21638e37b1a7c44006f636b7d714fe7242138
2022-10-07 18:49:40 -07:00
Yanqin Jin 11943e8b27 Exclude timestamp when checking compaction boundaries (#10787)
Summary:
When checking if a range [start, end) overlaps with a compaction whose range is [start1, end1), always exclude timestamp from start, end, start1 and end1, otherwise some versions of one user key may be compacted to bottommost layer while others remain in the original level.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10787

Test Plan: make check

Reviewed By: ltamasi

Differential Revision: D40187672

Pulled By: ltamasi

fbshipit-source-id: 81226267fd3e33ffa79665c62abadf2ebec45496
2022-10-07 14:11:23 -07:00
Jay Zhuang 23fa5b7789 Use sstableKeyCompare() for compaction output boundary check (#10763)
Summary:
To make it consistent with the compaction picker which uses the `sstableKeyCompare()` to pick the overlap files. For example, without this change, it may cut L1 files like:
```
 L1: [2-21]  [22-30]
 L2: [1-10] [21-30]
```
Because "21" on L1 is smaller than "21" on L2. But for compaction, these 2 files are overlapped.
`sstableKeyCompare()` also take range delete into consideration which may cut file for the same key.
It also makes the `max_compaction_bytes` calculation more accurate for cases like above, the overlapped bytes was under estimated. Also make sure the 2 keys won't be splitted to 2 files because of reaching `max_compaction_bytes`.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10763

Reviewed By: cbi42

Differential Revision: D39971904

Pulled By: cbi42

fbshipit-source-id: bcc309e9c3dc61a8f50667a6f633e6132c0154a8
2022-10-06 15:54:58 -07:00
Jay Zhuang f007ad8b4f RoundRobin TTL compaction (#10725)
Summary:
For RoundRobin compaction, the data should be mostly sorted per level and within level. Use normal compaction picker for RR until all expired data is compacted.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10725

Reviewed By: ajkr

Differential Revision: D39771069

Pulled By: jay-zhuang

fbshipit-source-id: 7ccf88d7c093fad5673bda73a7b08cc4757780cd
2022-10-04 14:53:32 -07:00
Changyu Bi 9f2363f4c4 User-defined timestamp support for DeleteRange() (#10661)
Summary:
Add user-defined timestamp support for range deletion. The new API is `DeleteRange(opt, cf, begin_key, end_key, ts)`. Most of the change is to update the comparator to compare without timestamp. Other than that, major changes are
- internal range tombstone data structures (`FragmentedRangeTombstoneList`, `RangeTombstone`, etc.) to store timestamps.
- Garbage collection of range tombstones and range tombstone covered keys during compaction.
- Get()/MultiGet() to return the timestamp of a range tombstone when needed.
- Get/Iterator with range tombstones bounded by readoptions.timestamp.
- timestamp crash test now issues DeleteRange by default.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10661

Test Plan:
- Added unit test: `make check`
- Stress test: `python3 tools/db_crashtest.py --enable_ts whitebox --readpercent=57 --prefixpercent=4 --writepercent=25 -delpercent=5 --iterpercent=5 --delrangepercent=4`
- Ran `db_bench` to measure regression when timestamp is not enabled. The tests are for write (with some range deletion) and iterate with DB fitting in memory: `./db_bench--benchmarks=fillrandom,seekrandom --writes_per_range_tombstone=200 --max_write_buffer_number=100 --min_write_buffer_number_to_merge=100 --writes=500000 --reads=500000 --seek_nexts=10 --disable_auto_compactions -disable_wal=true --max_num_range_tombstones=1000`.  Did not see consistent regression in no timestamp case.

| micros/op | fillrandom | seekrandom |
| --- | --- | --- |
|main| 2.58 |10.96|
|PR 10661| 2.68 |10.63|

Reviewed By: riversand963

Differential Revision: D39441192

Pulled By: cbi42

fbshipit-source-id: f05aca3c41605caf110daf0ff405919f300ddec2
2022-09-30 16:13:03 -07:00
Changyu Bi fd71a82f4f Use actual file size when checking max_compaction_size (#10728)
Summary:
currently, there are places in compaction_picker where we add up `compensated_file_size` of files being compacted and limit the sum to be under `max_compaction_bytes`. `compensated_file_size` contains booster for point tombstones and should be used only for determining file's compaction priority. This PR replaces `compensated_file_size` with actual file size in such places.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10728

Test Plan: CI

Reviewed By: ajkr

Differential Revision: D39789427

Pulled By: cbi42

fbshipit-source-id: 1f89fb6c0159c53bf01d8dc783f465959f442c81
2022-09-30 10:50:44 -07:00
Jay Zhuang f3cc66632b Align compaction output file boundaries to the next level ones (#10655)
Summary:
Try to align the compaction output file boundaries to the next level ones
(grandparent level), to reduce the level compaction write-amplification.

In level compaction, there are "wasted" data at the beginning and end of the
output level files. Align the file boundary can avoid such "wasted" compaction.
With this PR, it tries to align the non-bottommost level file boundaries to its
next level ones. It may cut file when the file size is large enough (at least
50% of target_file_size) and not too large (2x target_file_size).

db_bench shows about 12.56% compaction reduction:
```
TEST_TMPDIR=/data/dbbench2 ./db_bench --benchmarks=fillrandom,readrandom -max_background_jobs=12 -num=400000000 -target_file_size_base=33554432

# baseline:
Flush(GB): cumulative 25.882, interval 7.216
Cumulative compaction: 285.90 GB write, 162.36 MB/s write, 269.68 GB read, 153.15 MB/s read, 2926.7 seconds

# with this change:
Flush(GB): cumulative 25.882, interval 7.753
Cumulative compaction: 249.97 GB write, 141.96 MB/s write, 233.74 GB read, 132.74 MB/s read, 2534.9 seconds
```

The compaction simulator shows a similar result (14% with 100G random data).
As a side effect, with this PR, the SST file size can exceed the
target_file_size, but is capped at 2x target_file_size. And there will be
smaller files. Here are file size statistics when loading 100GB with the target
file size 32MB:
```
          baseline      this_PR
count  1.656000e+03  1.705000e+03
mean   3.116062e+07  3.028076e+07
std    7.145242e+06  8.046139e+06
```

The feature is enabled by default, to revert to the old behavior disable it
with `AdvancedColumnFamilyOptions.level_compaction_dynamic_file_size = false`

Also includes https://github.com/facebook/rocksdb/issues/1963 to cut file before skippable grandparent file. Which is for
use case like user adding 2 or more non-overlapping data range at the same
time, it can reduce the overlapping of 2 datasets in the lower levels.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10655

Reviewed By: cbi42

Differential Revision: D39552321

Pulled By: jay-zhuang

fbshipit-source-id: 640d15f159ab0cd973f2426cfc3af266fc8bdde2
2022-09-29 19:43:55 -07:00
Jay Zhuang 92df36985d Deflake CompactionServiceTest.BasicCompactions (#10697)
Summary:
The background compaction may still running while the test end, which would cause ASAN stack-use-after-scope error.
Explicitly close the DB before test end.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10697

Test Plan:
able to reproduce with:
```
gtest-parallel ./compaction_service_test --gtest_filter=CompactionServiceTest.BasicCompactions -r 10000 -w 100
```

Reviewed By: gitbw95

Differential Revision: D39590974

Pulled By: jay-zhuang

fbshipit-source-id: da264b2e6a276afbda7d5ff7adb9d7b8d4213d90
2022-09-19 14:10:05 -07:00
Jay Zhuang 849cf1bf68 Refactor Compaction file cut ShouldStopBefore() (#10629)
Summary:
Consolidate compaction output cut logic to `ShouldStopBefore()` and move
it inside of CompactionOutputs class.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10629

Reviewed By: cbi42

Differential Revision: D39315536

Pulled By: jay-zhuang

fbshipit-source-id: 7d81037babbd35c276bbaad02dbc2bb555fdac18
2022-09-14 22:09:12 -07:00
Yanqin Jin ce2c11d848 Fix a bug by setting up subcompaction bounds properly (#10658)
Summary:
When user-defined timestamp is enabled, subcompaction bounds should be set up properly. When creating InputIterator for the compaction, the `start` and `end` should have their timestamp portions set to kMaxTimestamp, which is the highest possible timestamp. This is similar to what we do with setting up their sequence numbers to `kMaxSequenceNumber`.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10658

Test Plan:
```bash
make check
rm -rf /dev/shm/rocksdb/* && mkdir
/dev/shm/rocksdb/rocksdb_crashtest_expected && ./db_stress
--allow_data_in_errors=True --clear_column_family_one_in=0
--continuous_verification_interval=0 --data_block_index_type=1
--db=/dev/shm/rocksdb//rocksdb_crashtest_blackbox --delpercent=5
--delrangepercent=0
--expected_values_dir=/dev/shm/rocksdb//rocksdb_crashtest_expected
--iterpercent=0 --max_background_compactions=20
--max_bytes_for_level_base=10485760 --max_key=25000000
--max_write_batch_group_size_bytes=1048576 --nooverwritepercent=1
--ops_per_thread=300000 --paranoid_file_checks=1 --partition_filters=0
--prefix_size=8 --prefixpercent=5 --readpercent=30 --reopen=0
--snapshot_hold_ops=100000 --subcompactions=4
--target_file_size_base=65536 --target_file_size_multiplier=2
--test_batches_snapshots=0 --test_cf_consistency=0 --use_multiget=1
--user_timestamp_size=8 --value_size_mult=32 --verify_checksum=1
--write_buffer_size=65536 --writepercent=60 -disable_wal=1
-column_families=1
```

Reviewed By: akankshamahajan15

Differential Revision: D39393402

Pulled By: riversand963

fbshipit-source-id: f276e35b19fce51a175c368a502fb0718d1f3871
2022-09-14 21:59:56 -07:00
Yanqin Jin 3d67d79154 Fix overlapping check by excluding timestamp (#10615)
Summary:
With user-defined timestamp, checking overlapping should exclude
timestamp part from key. This has already been done for range checking
for files in sstableKeyCompare(), but not yet done when checking with
concurrent compactions.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10615

Test Plan:
(Will add more tests)

make check
(Repro seems easier with this commit sha: git checkout 78bbdef530)
rm -rf /dev/shm/rocksdb/* &&
mkdir /dev/shm/rocksdb/rocksdb_crashtest_expected &&
./db_stress
--allow_data_in_errors=True --clear_column_family_one_in=0
--continuous_verification_interval=0 --data_block_index_type=1
--db=/dev/shm/rocksdb//rocksdb_crashtest_blackbox --delpercent=5
--delrangepercent=0
--expected_values_dir=/dev/shm/rocksdb//rocksdb_crashtest_expected
--iterpercent=0 --max_background_compactions=20
--max_bytes_for_level_base=10485760 --max_key=25000000
--max_write_batch_group_size_bytes=1048576 --nooverwritepercent=1
--ops_per_thread=1000000 --paranoid_file_checks=1 --partition_filters=0
--prefix_size=8 --prefixpercent=5 --readpercent=30 --reopen=0
--snapshot_hold_ops=100000 --subcompactions=1 --compaction_pri=3
--target_file_size_base=65536 --target_file_size_multiplier=2
--test_batches_snapshots=0 --test_cf_consistency=0 --use_multiget=1
--user_timestamp_size=8 --value_size_mult=32 --verify_checksum=1
--write_buffer_size=65536 --writepercent=60 -disable_wal=1

Reviewed By: akankshamahajan15

Differential Revision: D39146797

Pulled By: riversand963

fbshipit-source-id: 7fca800026ca6219220100b8b6cf84d907828163
2022-09-08 13:03:07 -07:00
Peter Dillinger 6de7081cf3 Always verify SST unique IDs on SST file open (#10532)
Summary:
Although we've been tracking SST unique IDs in the DB manifest
unconditionally, checking has been opt-in and with an extra pass at DB::Open
time. This changes the behavior of `verify_sst_unique_id_in_manifest` to
check unique ID against manifest every time an SST file is opened through
table cache (normal DB operations), replacing the explicit pass over files
at DB::Open time. This change also enables the option by default and
removes the "EXPERIMENTAL" designation.

One possible criticism is that the option no longer ensures the integrity
of a DB at Open time. This is far from an all-or-nothing issue. Verifying
the IDs of all SST files hardly ensures all the data in the DB is readable.
(VerifyChecksum is supposed to do that.) Also, with
max_open_files=-1 (default, extremely common), all SST files are
opened at DB::Open time anyway.

Implementation details:
* `VerifySstUniqueIdInManifest()` functions are the extra/explicit pass
that is now removed.
* Unit tests that manipulate/corrupt table properties have to opt out of
this check, because that corrupts the "actual" unique id. (And even for
testing we don't currently have a mechanism to set "no unique id"
in the in-memory file metadata for new files.)
* A lot of other unit test churn relates to (a) default checking on, and
(b) checking on SST open even without DB::Open (e.g. on flush)
* Use `FileMetaData` for more `TableCache` operations (in place of
`FileDescriptor`) so that we have access to the unique_id whenever
we might need to open an SST file. **There is the possibility of
performance impact because we can no longer use the more
localized `fd` part of an `FdWithKeyRange` but instead follow the
`file_metadata` pointer. However, this change (possible regression)
is only done for `GetMemoryUsageByTableReaders`.**
* Removed a completely unnecessary constructor overload of
`TableReaderOptions`

Possible follow-up:
* Verification only happens when opening through table cache. Are there
more places where this should happen?
* Improve error message when there is a file size mismatch vs. manifest
(FIXME added in the appropriate place).
* I'm not sure there's a justification for `FileDescriptor` to be distinct from
`FileMetaData`.
* I'm skeptical that `FdWithKeyRange` really still makes sense for
optimizing some data locality by duplicating some data in memory, but I
could be wrong.
* An unnecessary overload of NewTableReader was recently added, in
the public API nonetheless (though unusable there). It should be cleaned
up to put most things under `TableReaderOptions`.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10532

Test Plan:
updated unit tests

Performance test showing no significant difference (just noise I think):
`./db_bench -benchmarks=readwhilewriting[-X10] -num=3000000 -disable_wal=1 -bloom_bits=8 -write_buffer_size=1000000 -target_file_size_base=1000000`
Before: readwhilewriting [AVG 10 runs] : 68702 (± 6932) ops/sec
After: readwhilewriting [AVG 10 runs] : 68239 (± 7198) ops/sec

Reviewed By: jay-zhuang

Differential Revision: D38765551

Pulled By: pdillinger

fbshipit-source-id: a827a708155f12344ab2a5c16e7701c7636da4c2
2022-09-07 22:52:42 -07:00
Hui Xiao 8a85946f58 Add missing mutex when reading from shared variable bg_bottom_compaction_scheduled_, bg_compaction_scheduled_ (#10610)
Summary:
**Context/Summary:**
According to https://github.com/facebook/rocksdb/blob/7.6.fb/db/compaction/compaction_job.h#L328-L332, any reading in the form of `*bg_compaction_scheduled_` , `*bg_bottom_compaction_scheduled_` should be protected by mutex, which isn't the case for some assert statement. This leads to a data race that can be repro-ed by the following command (command coming soon)

```
db=/dev/shm/rocksdb_crashtest_blackbox
exp=/dev/shm/rocksdb_crashtest_expected
rm -rf $db $exp
mkdir -p $exp

./db_stress --clear_column_family_one_in=0 --column_families=1 --db=$db --delpercent=10 --delrangepercent=0 --destroy_db_initially=1 --expected_values_dir=$exp --iterpercent=0 --key_len_percent_dist=1,30,69 --max_key=1000000 --max_key_len=3 --prefixpercent=0 --readpercent=0 --reopen=0 --ops_per_thread=100000000 --value_size_mult=32 --writepercent=90  --compaction_pri=4 --use_txn=1 --level_compaction_dynamic_level_bytes=True  --compaction_ttl=0  --compact_files_one_in=1000000 --compact_range_one_in=1000000 --value_size_mult=32 --verify_db_one_in=1000  --write_buffer_size=65536 --mark_for_compaction_one_file_in=10 --max_background_compactions=20 --max_key=25000000 --max_key_len=3 --max_write_buffer_number=3 --max_write_buffer_size_to_maintain=2097152 --target_file_size_base=2097152 --target_file_size_multiplier=2
```
```
WARNING: ThreadSanitizer: data race (pid=73424)
  Read of size 4 at 0x7b8c0000151c by thread T13:
    #0 ReleaseSubcompactionResources internal_repo_rocksdb/repo/db/compaction/compaction_job.cc:390 (db_stress+0x630aa3)
    https://github.com/facebook/rocksdb/issues/1 rocksdb::CompactionJob::Run() internal_repo_rocksdb/repo/db/compaction/compaction_job.cc:741 (db_stress+0x630aa3)
    https://github.com/facebook/rocksdb/issues/2 rocksdb::DBImpl::BackgroundCompaction(bool*, rocksdb::JobContext*, rocksdb::LogBuffer*, rocksdb::DBImpl::PrepickedCompaction*, rocksdb::Env::Priority) internal_repo_rocksdb/repo/db/db_impl/db_impl_compaction_flush.cc:3436 (db_stress+0x60b2cc)
    https://github.com/facebook/rocksdb/issues/3 rocksdb::DBImpl::BackgroundCallCompaction(rocksdb::DBImpl::PrepickedCompaction*, rocksdb::Env::Priority) internal_repo_rocksdb/repo/db/db_impl/db_impl_compaction_flush.cc:2950 (db_stress+0x606d79)
    https://github.com/facebook/rocksdb/issues/4 rocksdb::DBImpl::BGWorkCompaction(void*) internal_repo_rocksdb/repo/db/db_impl/db_impl_compaction_flush.cc:2693 (db_stress+0x60356a)

  Previous write of size 4 at 0x7b8c0000151c by thread T12 (mutexes: write M438955329917552448):
    #0 rocksdb::DBImpl::BackgroundCallCompaction(rocksdb::DBImpl::PrepickedCompaction*, rocksdb::Env::Priority) internal_repo_rocksdb/repo/db/db_impl/db_impl_compaction_flush.cc:3018 (db_stress+0x6072a1)
    https://github.com/facebook/rocksdb/issues/1 rocksdb::DBImpl::BGWorkCompaction(void*) internal_repo_rocksdb/repo/db/db_impl/db_impl_compaction_flush.cc:2693 (db_stress+0x60356a)

Location is heap block of size 6720 at 0x7b8c00000000 allocated by main thread:
    #0 operator new(unsigned long, std::align_val_t) <null> (db_stress+0xbab5bb)
    https://github.com/facebook/rocksdb/issues/1 rocksdb::DBImpl::Open(rocksdb::DBOptions const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::vector<rocksdb::ColumnFamilyDescriptor, std::allocator<rocksdb::ColumnFamilyDescriptor> > const&, std::vector<rocksdb::ColumnFamilyHandle*, std::allocator<rocksdb::ColumnFamilyHandle*> >*, rocksdb::DB**, bool, bool) internal_repo_rocksdb/repo/db/db_impl/db_impl_open.cc:1811 (db_stress+0x69769a)
    https://github.com/facebook/rocksdb/issues/2 rocksdb::TransactionDB::Open(rocksdb::DBOptions const&, rocksdb::TransactionDBOptions const&, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > const&, std::vector<rocksdb::ColumnFamilyDescriptor, std::allocator<rocksdb::ColumnFamilyDescriptor> > const&, std::vector<rocksdb::ColumnFamilyHandle*, std::allocator<rocksdb::ColumnFamilyHandle*> >*, rocksdb::TransactionDB**) internal_repo_rocksdb/repo/utilities/transactions/pessimistic_transaction_db.cc:258 (db_stress+0x8ae1f4)
    https://github.com/facebook/rocksdb/issues/3 rocksdb::StressTest::Open(rocksdb::SharedState*) internal_repo_rocksdb/repo/db_stress_tool/db_stress_test_base.cc:2611 (db_stress+0x32b927)
    https://github.com/facebook/rocksdb/issues/4 rocksdb::StressTest::InitDb(rocksdb::SharedState*) internal_repo_rocksdb/repo/db_stress_tool/db_stress_test_base.cc:290 (db_stress+0x34712c)
```
This PR added all the missing mutex that should've been in place

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10610

Test Plan:
- Past repro command
- Existing CI

Reviewed By: riversand963

Differential Revision: D39143016

Pulled By: hx235

fbshipit-source-id: 51dd4db55ad306f3dbda5d0dd54d6f2513cf70f2
2022-08-30 16:24:01 -07:00
Hui Xiao e484b81eee Sync dir containing CURRENT after RenameFile on CURRENT as much as possible (#10573)
Summary:
**Context:**
Below crash test revealed a bug that directory containing CURRENT file (short for `dir_contains_current_file` below) was not always get synced after a new CURRENT is created and being called with `RenameFile` as part of the creation.

This bug exposes a risk that such un-synced directory containing the updated CURRENT can’t survive a host crash (e.g, power loss) hence get corrupted. This then will be followed by a recovery from a corrupted CURRENT that we don't want.

The root-cause is that a nullptr `FSDirectory* dir_contains_current_file` sometimes gets passed-down to `SetCurrentFile()` hence in those case `dir_contains_current_file->FSDirectory::FsyncWithDirOptions()` will be skipped  (which otherwise will internally call`Env/FS::SyncDic()` )
```
./db_stress --acquire_snapshot_one_in=10000 --adaptive_readahead=1 --allow_data_in_errors=True --avoid_unnecessary_blocking_io=0 --backup_max_size=104857600 --backup_one_in=100000 --batch_protection_bytes_per_key=8 --block_size=16384 --bloom_bits=134.8015470676662 --bottommost_compression_type=disable --cache_size=8388608 --checkpoint_one_in=1000000 --checksum_type=kCRC32c --clear_column_family_one_in=0 --compact_files_one_in=1000000 --compact_range_one_in=1000000 --compaction_pri=2 --compaction_ttl=100 --compression_max_dict_buffer_bytes=511 --compression_max_dict_bytes=16384 --compression_type=zstd --compression_use_zstd_dict_trainer=1 --compression_zstd_max_train_bytes=65536 --continuous_verification_interval=0 --data_block_index_type=0 --db=$db --db_write_buffer_size=1048576 --delpercent=5 --delrangepercent=0 --destroy_db_initially=0 --disable_wal=0 --enable_compaction_filter=0 --enable_pipelined_write=1 --expected_values_dir=$exp --fail_if_options_file_error=1 --file_checksum_impl=none --flush_one_in=1000000 --get_current_wal_file_one_in=0 --get_live_files_one_in=1000000 --get_property_one_in=1000000 --get_sorted_wal_files_one_in=0 --index_block_restart_interval=4 --ingest_external_file_one_in=0 --iterpercent=10 --key_len_percent_dist=1,30,69 --level_compaction_dynamic_level_bytes=True --mark_for_compaction_one_file_in=10 --max_background_compactions=20 --max_bytes_for_level_base=10485760 --max_key=10000 --max_key_len=3 --max_manifest_file_size=16384 --max_write_batch_group_size_bytes=64 --max_write_buffer_number=3 --max_write_buffer_size_to_maintain=0 --memtable_prefix_bloom_size_ratio=0.001 --memtable_protection_bytes_per_key=1 --memtable_whole_key_filtering=1 --mmap_read=1 --nooverwritepercent=1 --open_metadata_write_fault_one_in=0 --open_read_fault_one_in=0 --open_write_fault_one_in=0 --ops_per_thread=100000000 --optimize_filters_for_memory=1 --paranoid_file_checks=1 --partition_pinning=2 --pause_background_one_in=1000000 --periodic_compaction_seconds=0 --prefix_size=5 --prefixpercent=5 --prepopulate_block_cache=1 --progress_reports=0 --read_fault_one_in=1000 --readpercent=45 --recycle_log_file_num=0 --reopen=0 --ribbon_starting_level=999 --secondary_cache_fault_one_in=32 --secondary_cache_uri=compressed_secondary_cache://capacity=8388608 --set_options_one_in=10000 --snapshot_hold_ops=100000 --sst_file_manager_bytes_per_sec=0 --sst_file_manager_bytes_per_truncate=0 --subcompactions=3 --sync_fault_injection=1 --target_file_size_base=2097 --target_file_size_multiplier=2 --test_batches_snapshots=1 --top_level_index_pinning=1 --use_full_merge_v1=1 --use_merge=1 --value_size_mult=32 --verify_checksum=1 --verify_checksum_one_in=1000000 --verify_db_one_in=100000 --verify_sst_unique_id_in_manifest=1 --wal_bytes_per_sync=524288 --write_buffer_size=4194 --writepercent=35
```

```
stderr:
WARNING: prefix_size is non-zero but memtablerep != prefix_hash
db_stress: utilities/fault_injection_fs.cc:748: virtual rocksdb::IOStatus rocksdb::FaultInjectionTestFS::RenameFile(const std::string &, const std::string &, const rocksdb::IOOptions &, rocksdb::IODebugContext *): Assertion `tlist.find(tdn.second) == tlist.end()' failed.`
```

**Summary:**
The PR ensured the non-test path pass down a non-null dir containing CURRENT (which is by current RocksDB assumption just db_dir) by doing the following:
- Renamed `directory_to_fsync` as `dir_contains_current_file` in `SetCurrentFile()` to tighten the association between this directory and CURRENT file
- Changed `SetCurrentFile()` API to require `dir_contains_current_file` being passed-in, instead of making it by default nullptr.
    -  Because `SetCurrentFile()`'s `dir_contains_current_file` is passed down from `VersionSet::LogAndApply()` then `VersionSet::ProcessManifestWrites()` (i.e, think about this as a chain of 3 functions related to MANIFEST update), these 2 functions also got refactored to require `dir_contains_current_file`
- Updated the non-test-path callers of these 3 functions to obtain and pass in non-nullptr `dir_contains_current_file`, which by current assumption of RocksDB, is the `FSDirectory* db_dir`.
    - `db_impl` path will obtain `DBImpl::directories_.getDbDir()` while others with no access to such `directories_` are obtained on the fly by creating such object `FileSystem::NewDirectory(..)` and manage it by unique pointers to ensure short life time.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10573

Test Plan:
- `make check`
- Passed the repro db_stress command
- For future improvement, since we currently don't assert dir containing CURRENT to be non-nullptr due to https://github.com/facebook/rocksdb/pull/10573#pullrequestreview-1087698899, there is still chances that future developers mistakenly pass down nullptr dir containing CURRENT thus resulting skipped sync dir and cause the bug again. Therefore a smarter test (e.g, such as quoted from ajkr  "(make) unsynced data loss to be dropping files corresponding to unsynced directory entries") is still needed.

Reviewed By: ajkr

Differential Revision: D39005886

Pulled By: hx235

fbshipit-source-id: 336fb9090d0cfa6ca3dd580db86268007dde7f5a
2022-08-29 17:35:21 -07:00
Chen Lixiang 9593fd1c82 Fix wrong compression type and options in universal compaction picker (#10515)
Summary:
In UniversalCompactionBuilder::PickCompactionToReduceSortedRuns, we passed start_level to get compression type and options. I think that is wrong and we should use output_level instead.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10515

Reviewed By: hx235

Differential Revision: D38611335

Pulled By: ajkr

fbshipit-source-id: bb860caed4b6c6bbde8f75fc50cf875a9f04723d
2022-08-23 14:58:02 -07:00
Changyu Bi fd165c869d Add memtable per key-value checksum (#10281)
Summary:
Append per key-value checksum to internal key. These checksums are verified on read paths including Get, Iterator and during Flush. Get and Iterator will return `Corruption` status if there is a checksum verification failure. Flush will make DB become read-only upon memtable entry checksum verification failure.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10281

Test Plan:
- Added new unit test cases: `make check`
- Benchmark on memtable insert
```
TEST_TMPDIR=/dev/shm/memtable_write ./db_bench -benchmarks=fillseq -disable_wal=true -max_write_buffer_number=100 -num=10000000 -min_write_buffer_number_to_merge=100

# avg over 10 runs
Baseline: 1166936 ops/sec
memtable 2 bytes kv checksum : 1.11674e+06 ops/sec (-4%)
memtable 2 bytes kv checksum + write batch 8 bytes kv checksum: 1.08579e+06 ops/sec (-6.95%)
write batch 8 bytes kv checksum: 1.17979e+06 ops/sec (+1.1%)
```
-  Benchmark on only memtable read: ops/sec dropped 31% for `readseq` due to time spend on verifying checksum.
ops/sec for `readrandom` dropped ~6.8%.
```
# Readseq
sudo TEST_TMPDIR=/dev/shm/memtable_read ./db_bench -benchmarks=fillseq,readseq"[-X20]" -disable_wal=true -max_write_buffer_number=100 -num=10000000 -min_write_buffer_number_to_merge=100

readseq [AVG    20 runs] : 7432840 (± 212005) ops/sec;  822.3 (± 23.5) MB/sec
readseq [MEDIAN 20 runs] : 7573878 ops/sec;  837.9 MB/sec

With -memtable_protection_bytes_per_key=2:

readseq [AVG    20 runs] : 5134607 (± 119596) ops/sec;  568.0 (± 13.2) MB/sec
readseq [MEDIAN 20 runs] : 5232946 ops/sec;  578.9 MB/sec

# Readrandom
sudo TEST_TMPDIR=/dev/shm/memtable_read ./db_bench -benchmarks=fillrandom,readrandom"[-X10]" -disable_wal=true -max_write_buffer_number=100 -num=1000000 -min_write_buffer_number_to_merge=100
readrandom [AVG    10 runs] : 140236 (± 3938) ops/sec;    9.8 (± 0.3) MB/sec
readrandom [MEDIAN 10 runs] : 140545 ops/sec;    9.8 MB/sec

With -memtable_protection_bytes_per_key=2:
readrandom [AVG    10 runs] : 130632 (± 2738) ops/sec;    9.1 (± 0.2) MB/sec
readrandom [MEDIAN 10 runs] : 130341 ops/sec;    9.1 MB/sec
```

- Stress test: `python3 -u tools/db_crashtest.py whitebox --duration=1800`

Reviewed By: ajkr

Differential Revision: D37607896

Pulled By: cbi42

fbshipit-source-id: fdaefb475629d2471780d4a5f5bf81b44ee56113
2022-08-12 13:51:32 -07:00
Peter Dillinger 9fa5c146d7 LOG more info on oldest snapshot and sequence numbers (#10454)
Summary:
The info LOG file does not currently give any direct
information about the existence of old, live snapshots, nor how to
estimate wall time from a sequence number within the scope of LOG
history. This change addresses both with:
* Logging smallest and largest seqnos for generated SST files, which can
help associate sequence numbers with write time (based on flushes).
* Logging oldest_snapshot_seqno for each compaction, which (along with
that seqno info) helps us to determine how much old data might be kept
around for old (leaked?) snapshots. Including the date here I thought might
be excessive.

I wanted to log the date and seqno of the oldest snapshot with periodic
stats, but the current structure of the code doesn't really support that
because `DumpDBStats` doesn't have access to the DB object.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10454

Test Plan:
manual inspect LOG from
`KEEP_DB=1 ./db_basic_test --gtest_filter=*CompactBetweenSnapshots*`

Reviewed By: ajkr

Differential Revision: D38326948

Pulled By: pdillinger

fbshipit-source-id: 294918ffc04a419844146cd826045321b4d5c038
2022-08-12 13:08:50 -07:00
sherriiiliu 4753e5a2e9 Fix wrong value passed in compaction filter in BlobDB (#10391)
Summary:
New blobdb has a bug in compaction filter, where `blob_value_` is not reset for next iterated key. This will cause blob_value_ not empty and previous value read from blob is passed into the filter function for next key, even if its value is not in blob. Fixed by reseting regardless of key type.

Test Case:
Add `FilterByValueLength` test case in `DBBlobCompactionTest`

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10391

Reviewed By: riversand963

Differential Revision: D38629900

Pulled By: ltamasi

fbshipit-source-id: 47d23ff2e5ec697958a210db9e6ceeb8b2fc49fa
2022-08-11 13:55:28 -07:00
Yanqin Jin fee2c472d0 Include minimal contextual information in CompactionIterator (#10505)
Summary:
The main purpose is to make debugging easier without sacrificing performance.

Instead of using a boolean variable for `CompactionIterator::valid_`, we can extend it to an `uint8_t`,
using the LSB to denote if the compaction iterator is valid and 4 additional bits to denote where
the iterator is set valid inside `NextFromInput()`. Therefore, when the control flow reaches
`PrepareOutput()` and hits assertion there, we can have a better idea of what has gone wrong.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10505

Test Plan:
make check
```
TEST_TMPDIR=/dev/shm/rocksdb time ./db_bench -compression_type=none -write_buffer_size=1073741824 -benchmarks=fillseq,flush
```
The above command has a 'flush' benchmark which uses `CompactionIterator`.  I haven't observed any CPU regression or drop in throughput or latency increase.

Reviewed By: ltamasi

Differential Revision: D38551615

Pulled By: riversand963

fbshipit-source-id: 1250848fc118bb753d71fa9ff8ba840df999f5e0
2022-08-09 17:07:24 -07:00
Jay Zhuang 3f763763aa Change bottommost_temperture to last_level_temperture (#10471)
Summary:
Change tiered compaction feature from `bottommost_temperture` to
`last_level_temperture`. The old option is kept for migration purpose only,
which is behaving the same as `last_level_temperture` and it will be removed in
the next release.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10471

Test Plan: CI

Reviewed By: siying

Differential Revision: D38450621

Pulled By: jay-zhuang

fbshipit-source-id: cc1cdf8bad409376fec0152abc0a64fb72a91527
2022-08-08 14:36:34 -07:00
Jay Zhuang 375534752a Improve universal compaction picker for tiered compaction (#10467)
Summary:
Current universal compaction picker may cause extra size amplification
compaction if there're more hot data on penultimate level. Improve the picker
to skip the last level for size amp calculation if tiered compaction is
enabled, which can
1. avoid extra unnecessary size amp compaction;
2. typically cold tier (the last level) is not size constrained, so skip size
   amp for cold tier is intended;

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10467

Test Plan: CI and added unittest

Reviewed By: siying

Differential Revision: D38391350

Pulled By: jay-zhuang

fbshipit-source-id: 103c0731c05e0a7e8f267e9e829d022328be25d2
2022-08-08 14:34:36 -07:00
Levi Tamasi cc8ded6152 Do not put blobs read during compaction into cache (#10457)
Summary:
During compaction, blobs are currently read using the default
`ReadOptions`, which has the `fill_cache` flag set to true. Earlier,
this didn't make any difference since we didn't have a blob cache;
however, now we have to explicitly set this flag to false to avoid
polluting the cache during compaction.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10457

Test Plan: `make check`

Reviewed By: riversand963

Differential Revision: D38333528

Pulled By: ltamasi

fbshipit-source-id: 5b4d49a1e39543bee73c7df2aa9194fb101875e2
2022-08-01 19:49:05 -07:00
Yanqin Jin fbfcf5cbcd Remove unused fields from FileMetaData (temporarily) (#10443)
Summary:
FileMetaData::[min|max]_timestamp are not currently being used or
tracked by RocksDB, even when user-defined timestamp is enabled. Each of
them is a std::string which can occupy 32 bytes. Remove them for now.
They may be added back when we have a pressing need for them. When we do
add them back, consider store them in a more compact way, e.g. one
boolean flag and a byte array of size 16.

Per file min/max timestamp bounds are available as table properties.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10443

Test Plan: make check

Reviewed By: pdillinger

Differential Revision: D38292275

Pulled By: riversand963

fbshipit-source-id: 841dc4e855ad8f8481c80cb020603de9607c9c94
2022-08-01 17:56:13 -07:00
Akanksha Mahajan 56463d443d Provide support for subcompactions with user-defined timestamps (#10344)
Summary:
The subcompaction logic currently picks file boundaries as subcompaction boundaries. This is not compatible with user-defined timestamps because of two issues.
Issue1: ReadOptions.iterate_lower_bound and ReadOptions.iterate_upper_bound contains timestamps which results in assertion failure as BlockBasedTableIterator expects bounds to be without timestamps. As result, because of wrong comparison end key is returned as user_key resulting in assertion failure.
Issue2: Since it might result in two keys that only differ by user timestamp getting processed by two different subcompactions (and thus two different CompactionIterator state machines), which in turn can cause data correction issues.

This PR provide support to reenable subcompactions with user-defined timestamps.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10344

Test Plan:
Added new unit test
- Without fix for Issue1 unit test MultipleSubCompactions fails with error:
```
db_with_timestamp_compaction_test: ./db/compaction/clipping_iterator.h:247: void rocksdb::ClippingIterat│
or::AssertBounds(): Assertion `!valid_ || !end_ || cmp_->Compare(key(), *end_) < 0' failed.
Received signal 6 (Aborted)                                                                             │
#0   /usr/local/fbcode/platform009/lib/libc.so.6(gsignal+0x100) [0x7f8fbbbfe530] db_with_timestamp_compaction_test: ./db/compaction/clipping_iterator.h:247: void rocksdb::ClippingIterator::AssertBounds(): Assertion `!valid_ || !end_ || cmp_->Compare(key(), *end_) < 0' failed.
Aborted (core dumped)
```
Ran stress test
`make crash_test_with_ts -j32`

Reviewed By: riversand963

Differential Revision: D38220841

Pulled By: akankshamahajan15

fbshipit-source-id: 5d5cae2bd37fcaeba1e77fce0a69070ad4158ccb
2022-07-31 11:39:16 -07:00
Zichen Zhu c945a9a664 Allow sufficient subcompactions under round-robin compaction priority (#10422)
Summary:
Allow sufficient subcompactions can be used when the number of input files is less than `max_subcompactions` under round-robin compaction priority.

Test Case:
Add `RoundRobinWithoutAdditionalResources` into `db_compaction_test`

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10422

Reviewed By: ajkr

Differential Revision: D38186545

Pulled By: littlepig2013

fbshipit-source-id: b8e5098306f1e5b9561dfafafc8300a38f7fe88e
2022-07-26 20:37:34 -07:00
Zichen Zhu 8860fc902a Support subcmpct using reserved resources for round-robin priority (#10341)
Summary:
Earlier implementation of round-robin priority can only pick one file at a time and disallows parallel compactions within the same level. In this PR, round-robin compaction policy will expand towards more input files with respecting some additional constraints, which are summarized as follows:
 * Constraint 1: We can only pick consecutive files
   - Constraint 1a: When a file is being compacted (or some input files are being compacted after expanding), we cannot choose it and have to stop choosing more files
   - Constraint 1b: When we reach the last file (with the largest keys), we cannot choose more files (the next file will be the first one with small keys)
 * Constraint 2: We should ensure the total compaction bytes (including the overlapped files from the next level) is no more than `mutable_cf_options_.max_compaction_bytes`
 * Constraint 3: We try our best to pick as many files as possible so that the post-compaction level size can be just less than `MaxBytesForLevel(start_level_)`
 * Constraint 4: If trivial move is allowed, we reuse the logic of `TryNonL0TrivialMove()` instead of expanding files with Constraint 3

More details can be found in `LevelCompactionBuilder::SetupOtherFilesWithRoundRobinExpansion()`.

The above optimization accelerates the process of moving the compaction cursor, in which the write-amp can be further reduced. While a large compaction may lead to high write stall, we break this large compaction into several subcompactions **regardless of** the `max_subcompactions` limit.  The number of subcompactions for round-robin compaction priority is determined through the following steps:
* Step 1: Initialized against `max_output_file_limit`, the number of input files in the start level, and also the range size limit `ranges.size()`
* Step 2: Call `AcquireSubcompactionResources()`when max subcompactions is not sufficient, but we may or may not obtain desired resources, additional number of resources is stored in `extra_num_subcompaction_threads_reserved_`). Subcompaction limit is changed and update `num_planned_subcompactions` with `GetSubcompactionLimit()`
* Step 3: Call `ShrinkSubcompactionResources()` to ensure extra resources can be released (extra resources may exist for round-robin compaction when the number of actual number of subcompactions is less than the number of planned subcompactions)

More details can be found in `CompactionJob::AcquireSubcompactionResources()`,`CompactionJob::ShrinkSubcompactionResources()`, and `CompactionJob::ReleaseSubcompactionResources()`.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10341

Test Plan: Add `CompactionPriMultipleFilesRoundRobin[1-3]` unit test in `compaction_picker_test.cc` and `RoundRobinSubcompactionsAgainstResources.SubcompactionsUsingResources/[0-4]`, `RoundRobinSubcompactionsAgainstPressureToken.PressureTokenTest/[0-1]` in `db_compaction_test.cc`

Reviewed By: ajkr, hx235

Differential Revision: D37792644

Pulled By: littlepig2013

fbshipit-source-id: 7fecb7c4ffd97b34bbf6e3b760b2c35a772a0657
2022-07-24 11:12:44 -07:00
sdong 252bea405e Improve SubCompaction Partitioning (#10393)
Summary:
Unit tests still haven't been fixed. Also need to add more tests. But I ran some simple fillrandom db_bench and the partitioning feels reasonable.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10393

Test Plan:
1. Make sure existing tests pass. This should cover some basic sub compaction logic to be correct and the partitioning result is reasonable;
2. Add a new unit test to ApproximateKeyAnchors()
3. Run some db_bench with max_subcompaction = 4 and watch the compaction is indeed partitioned evenly.

Reviewed By: jay-zhuang

Differential Revision: D38043783

fbshipit-source-id: 085008e0f85f9b7c5abff7800307618320efb19f
2022-07-23 17:38:49 -07:00
LIU HU 8885b0537b Fix underflow in FIFOCompactionPicker (#10386)
Summary:
Fix https://github.com/facebook/rocksdb/issues/10133

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10386

Reviewed By: riversand963

Differential Revision: D38067265

Pulled By: ajkr

fbshipit-source-id: 3a99a98ac5d7ac37581b5b636fbfa7901563d834
2022-07-22 09:20:35 -07:00
Gang Liao ec4ebeff30 Support prepopulating/warming the blob cache (#10298)
Summary:
Many workloads have temporal locality, where recently written items are read back in a short period of time. When using remote file systems, this is inefficient since it involves network traffic and higher latencies. Because of this, we would like to support prepopulating the blob cache during flush.

This task is a part of https://github.com/facebook/rocksdb/issues/10156

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10298

Reviewed By: ltamasi

Differential Revision: D37908743

Pulled By: gangliao

fbshipit-source-id: 9feaed234bc719d38f0c02975c1ad19fa4bb37d1
2022-07-17 07:13:59 -07:00
Jay Zhuang faa0f9723c Tiered compaction: integrate Seqno time mapping with per key placement (#10370)
Summary:
Using the Sequence number to time mapping to decide if a key is hot or not in
compaction and place it in the corresponding level.

Note: the feature is not complete, level compaction will run indefinitely until
all penultimate level data is cold and small enough to not trigger compaction.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10370

Test Plan:
CI
* Run basic db_bench for universal compaction manually

Reviewed By: siying

Differential Revision: D37892338

Pulled By: jay-zhuang

fbshipit-source-id: 792bbd91b1ccc2f62b5d14c53118434bcaac4bbe
2022-07-15 19:01:30 -07:00
Jay Zhuang a3acf2ef87 Add seqno to time mapping (#10338)
Summary:
Which will be used for tiered storage to preclude hot data from
compacting to the cold tier (the last level).
Internally, adding seqno to time mapping. A periodic_task is scheduled
to record the current_seqno -> current_time in certain cadence. When
memtable flush, the mapping informaiton is stored in sstable property.
During compaction, the mapping information are merged and get the
approximate time of sequence number, which is used to determine if a key
is recently inserted or not and preclude it from the last level if it's
recently inserted (within the `preclude_last_level_data_seconds`).

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10338

Test Plan: CI

Reviewed By: siying

Differential Revision: D37810187

Pulled By: jay-zhuang

fbshipit-source-id: 6953be7a18a99de8b1cb3b162d712f79c2b4899f
2022-07-14 21:49:34 -07:00
sdong c8b20d469d Make InternalKeyComparator not configurable (#10342)
Summary:
InternalKeyComparator is an internal class which is a simple wrapper of Comparator. https://github.com/facebook/rocksdb/pull/8336 made Comparator customizeable. As a side effect, internal key comparator was made configurable too. This introduces overhead to this simple wrapper. For example, every InternalKeyComparator will have an std::vector attached to it, which consumes memory and possible allocation overhead too.
We remove InternalKeyComparator from being customizable by making InternalKeyComparator not a subclass of Comparator.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10342

Test Plan: Run existing CI tests and make sure it doesn't fail

Reviewed By: riversand963

Differential Revision: D37771351

fbshipit-source-id: 917256ee04b2796ed82974549c734fb6c4d8ccee
2022-07-14 10:09:31 -07:00
Jay Zhuang 6ce0b2ca34 Tiered Compaction: per key placement support (#9964)
Summary:
Support per_key_placement for last level compaction, which will
be used for tiered compaction.
* compaction iterator reports which level a key should output to;
* compaction get the output level information and check if it's safe to
  output the data to penultimate level;
* all compaction output files will be installed.
* extra internal compaction stats added for penultimate level.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/9964

Test Plan:
* Unittest
* db_bench, no significate difference: https://gist.github.com/jay-zhuang/3645f8fb97ec0ab47c10704bb39fd6e4
* microbench manual compaction no significate difference: https://gist.github.com/jay-zhuang/ba679b3e89e24992615ee9eef310e6dd
* run the db_stress multiple times (not covering the new feature) looks good (internal: https://fburl.com/sandcastle/9w84pp2m)

Reviewed By: ajkr

Differential Revision: D36249494

Pulled By: jay-zhuang

fbshipit-source-id: a96da57c8031c1df83e4a7a8567b657a112b80a3
2022-07-13 20:54:49 -07:00
sdong 769b156e65 Remove customized naming from InternalKeyComparator (#10343)
Summary:
InternalKeyComparator is a thin wrapper around user comparator. Storing a string for name is relatively expensive to this small wrapper for both CPU and memory usage. Try to remove it.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10343

Test Plan: Run existing tests

Reviewed By: ajkr

Differential Revision: D37772469

fbshipit-source-id: d2d106a8d022193058fd7f6b220108e3d94aca34
2022-07-12 13:30:35 -07:00
zczhu 8debfe2b21 Replace the output split key with its pointer in subcompaction (#10316)
Summary:
Earlier implementation of cutting the output files with a compact cursor under Round-Robin priority uses `Valid()` to determine if the `output_split_key` is valid in `ShouldStopBefore`. This contributes to excessive CPU computation, as pointed out by [this issue](https://github.com/facebook/rocksdb/issues/10315). In this PR, we change the type of `output_split_key` to be `InternalKey*` and set it as `nullptr` if it is not going to be used in `ShouldStopBefore`, `Valid()` condition checking can be avoided using that pointer.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10316

Reviewed By: ajkr

Differential Revision: D37661492

Pulled By: littlepig2013

fbshipit-source-id: 66ff1105f3378e5573d3a126fdaff9bb23b5498f
2022-07-06 16:19:45 -07:00
sdong a9565ccb26 Try to trivial move more than one files (#10190)
Summary:
In leveled compaction, try to trivial move more than one files if possible, up to 4 files or max_compaction_bytes. This is to allow higher write throughput for some use cases where data is loaded in sequential order, where appying compaction results is the bottleneck.

When pick up a file to compact and it doesn't have overlapping files in the next level, try to expand to the next file if there is still no overlapping.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10190

Test Plan:
Add some unit tests.
For performance, Try to run
./db_bench_multi_move --benchmarks=fillseq --compression_type=lz4 --write_buffer_size=5000000 --num=100000000 --value_size=1000 -level_compaction_dynamic_level_bytes
Together with https://github.com/facebook/rocksdb/pull/10188 , stalling will be eliminated in this benchmark.

Reviewed By: jay-zhuang

Differential Revision: D37230647

fbshipit-source-id: 42b260f545c46abc5d90335ac2bbfcd09602b549
2022-07-05 10:10:37 -07:00
sdong 4428c76181 Multi-File Trivial Move in L0->L1 (#10188)
Summary:
In leveled compaction, L0->L1 trivial move will allow more than one file to be moved in one compaction. This would allow L0 files to be moved down faster when data is loaded in sequential order, making slowdown or stop condition harder to hit. Also seek L0->L1 trivial move when only some files qualify.
1. We always try to find L0->L1 trivial move from the oldest files. Keep including newer files, until adding a new file won't trigger a trivial move
2. Modify the trivial move condition so that this compaction would be tagged as trivial move.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10188

Test Plan:
See throughput improvements with db_bench with fast fillseq benchmark and small L0 files:

./db_bench_l0_move --benchmarks=fillseq --compression_type=lz4 --write_buffer_size=5000000 --num=100000000 --value_size=1000 -level_compaction_dynamic_level_bytes

The throughput improved by about 50%. Stalling still happens though.

Reviewed By: jay-zhuang

Differential Revision: D37224743

fbshipit-source-id: 8958d97f22e12bdfc14d2e85930f6fa0070e9659
2022-06-30 18:04:23 -07:00
zczhu 4f51101d31 Remove compact cursor when split sub-compactions (#10289)
Summary:
In round-robin compaction priority, when splitting the compaction into sub-compactions, the earlier implementation takes into account the compact cursor to have full use of available sub-compactions. But this may result in unbalanced sub-compactions, so we remove this here.  The removal does not affect the cursor-based splitting mechanism within a sub-compaction, and thus the output files are still ensured to be split according to the cursor.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10289

Reviewed By: ajkr

Differential Revision: D37559091

Pulled By: littlepig2013

fbshipit-source-id: b8b45b99f63b09cf873f7f049bcb4ab13871fffc
2022-06-30 15:36:46 -07:00
Levi Tamasi c73d2a9d18 Add API for writing wide-column entities (#10242)
Summary:
The patch builds on https://github.com/facebook/rocksdb/pull/9915 and adds
a new API called `PutEntity` that can be used to write a wide-column entity
to the database. The new API is added to both `DB` and `WriteBatch`. Note
that currently there is no way to retrieve these entities; more precisely, all
read APIs (`Get`, `MultiGet`, and iterator) return `NotSupported` when they
encounter a wide-column entity that is required to answer a query. Read-side
support (as well as other missing functionality like `Merge`, compaction filter,
and timestamp support) will be added in later PRs.

Pull Request resolved: https://github.com/facebook/rocksdb/pull/10242

Test Plan: `make check`

Reviewed By: riversand963

Differential Revision: D37369748

Pulled By: ltamasi

fbshipit-source-id: 7f5e412359ed7a400fd80b897dae5599dbcd685d
2022-06-25 15:30:47 -07:00