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21 commits
| Author | SHA1 | Message | Date | |
|---|---|---|---|---|
Hui Xiao
|
06e593376c |
Group SST write in flush, compaction and db open with new stats (#11910)
Summary: ## Context/Summary Similar to https://github.com/facebook/rocksdb/pull/11288, https://github.com/facebook/rocksdb/pull/11444, categorizing SST/blob file write according to different io activities allows more insight into the activity. For that, this PR does the following: - Tag different write IOs by passing down and converting WriteOptions to IOOptions - Add new SST_WRITE_MICROS histogram in WritableFileWriter::Append() and breakdown FILE_WRITE_{FLUSH|COMPACTION|DB_OPEN}_MICROS Some related code refactory to make implementation cleaner: - Blob stats - Replace high-level write measurement with low-level WritableFileWriter::Append() measurement for BLOB_DB_BLOB_FILE_WRITE_MICROS. This is to make FILE_WRITE_{FLUSH|COMPACTION|DB_OPEN}_MICROS include blob file. As a consequence, this introduces some behavioral changes on it, see HISTORY and db bench test plan below for more info. - Fix bugs where BLOB_DB_BLOB_FILE_SYNCED/BLOB_DB_BLOB_FILE_BYTES_WRITTEN include file failed to sync and bytes failed to write. - Refactor WriteOptions constructor for easier construction with io_activity and rate_limiter_priority - Refactor DBImpl::~DBImpl()/BlobDBImpl::Close() to bypass thread op verification - Build table - TableBuilderOptions now includes Read/WriteOpitons so BuildTable() do not need to take these two variables - Replace the io_priority passed into BuildTable() with TableBuilderOptions::WriteOpitons::rate_limiter_priority. Similar for BlobFileBuilder. This parameter is used for dynamically changing file io priority for flush, see https://github.com/facebook/rocksdb/pull/9988?fbclid=IwAR1DtKel6c-bRJAdesGo0jsbztRtciByNlvokbxkV6h_L-AE9MACzqRTT5s for more - Update ThreadStatus::FLUSH_BYTES_WRITTEN to use io_activity to track flush IO in flush job and db open instead of io_priority ## Test ### db bench Flush ``` ./db_bench --statistics=1 --benchmarks=fillseq --num=100000 --write_buffer_size=100 rocksdb.sst.write.micros P50 : 1.830863 P95 : 4.094720 P99 : 6.578947 P100 : 26.000000 COUNT : 7875 SUM : 20377 rocksdb.file.write.flush.micros P50 : 1.830863 P95 : 4.094720 P99 : 6.578947 P100 : 26.000000 COUNT : 7875 SUM : 20377 rocksdb.file.write.compaction.micros P50 : 0.000000 P95 : 0.000000 P99 : 0.000000 P100 : 0.000000 COUNT : 0 SUM : 0 rocksdb.file.write.db.open.micros P50 : 0.000000 P95 : 0.000000 P99 : 0.000000 P100 : 0.000000 COUNT : 0 SUM : 0 ``` compaction, db oopen ``` Setup: ./db_bench --statistics=1 --benchmarks=fillseq --num=10000 --disable_auto_compactions=1 -write_buffer_size=100 --db=../db_bench Run:./db_bench --statistics=1 --benchmarks=compact --db=../db_bench --use_existing_db=1 rocksdb.sst.write.micros P50 : 2.675325 P95 : 9.578788 P99 : 18.780000 P100 : 314.000000 COUNT : 638 SUM : 3279 rocksdb.file.write.flush.micros P50 : 0.000000 P95 : 0.000000 P99 : 0.000000 P100 : 0.000000 COUNT : 0 SUM : 0 rocksdb.file.write.compaction.micros P50 : 2.757353 P95 : 9.610687 P99 : 19.316667 P100 : 314.000000 COUNT : 615 SUM : 3213 rocksdb.file.write.db.open.micros P50 : 2.055556 P95 : 3.925000 P99 : 9.000000 P100 : 9.000000 COUNT : 23 SUM : 66 ``` blob stats - just to make sure they aren't broken by this PR ``` Integrated Blob DB Setup: ./db_bench --enable_blob_files=1 --statistics=1 --benchmarks=fillseq --num=10000 --disable_auto_compactions=1 -write_buffer_size=100 --db=../db_bench Run:./db_bench --enable_blob_files=1 --statistics=1 --benchmarks=compact --db=../db_bench --use_existing_db=1 pre-PR: rocksdb.blobdb.blob.file.write.micros P50 : 7.298246 P95 : 9.771930 P99 : 9.991813 P100 : 16.000000 COUNT : 235 SUM : 1600 rocksdb.blobdb.blob.file.synced COUNT : 1 rocksdb.blobdb.blob.file.bytes.written COUNT : 34842 post-PR: rocksdb.blobdb.blob.file.write.micros P50 : 2.000000 P95 : 2.829360 P99 : 2.993779 P100 : 9.000000 COUNT : 707 SUM : 1614 - COUNT is higher and values are smaller as it includes header and footer write - COUNT is 3X higher due to each Append() count as one post-PR, while in pre-PR, 3 Append()s counts as one. See https://github.com/facebook/rocksdb/pull/11910/files#diff-32b811c0a1c000768cfb2532052b44dc0b3bf82253f3eab078e15ff201a0dabfL157-L164 rocksdb.blobdb.blob.file.synced COUNT : 1 (stay the same) rocksdb.blobdb.blob.file.bytes.written COUNT : 34842 (stay the same) ``` ``` Stacked Blob DB Run: ./db_bench --use_blob_db=1 --statistics=1 --benchmarks=fillseq --num=10000 --disable_auto_compactions=1 -write_buffer_size=100 --db=../db_bench pre-PR: rocksdb.blobdb.blob.file.write.micros P50 : 12.808042 P95 : 19.674497 P99 : 28.539683 P100 : 51.000000 COUNT : 10000 SUM : 140876 rocksdb.blobdb.blob.file.synced COUNT : 8 rocksdb.blobdb.blob.file.bytes.written COUNT : 1043445 post-PR: rocksdb.blobdb.blob.file.write.micros P50 : 1.657370 P95 : 2.952175 P99 : 3.877519 P100 : 24.000000 COUNT : 30001 SUM : 67924 - COUNT is higher and values are smaller as it includes header and footer write - COUNT is 3X higher due to each Append() count as one post-PR, while in pre-PR, 3 Append()s counts as one. See https://github.com/facebook/rocksdb/pull/11910/files#diff-32b811c0a1c000768cfb2532052b44dc0b3bf82253f3eab078e15ff201a0dabfL157-L164 rocksdb.blobdb.blob.file.synced COUNT : 8 (stay the same) rocksdb.blobdb.blob.file.bytes.written COUNT : 1043445 (stay the same) ``` ### Rehearsal CI stress test Trigger 3 full runs of all our CI stress tests ### Performance Flush ``` TEST_TMPDIR=/dev/shm ./db_basic_bench_pre_pr --benchmark_filter=ManualFlush/key_num:524288/per_key_size:256 --benchmark_repetitions=1000 -- default: 1 thread is used to run benchmark; enable_statistics = true Pre-pr: avg 507515519.3 ns 497686074,499444327,500862543,501389862,502994471,503744435,504142123,504224056,505724198,506610393,506837742,506955122,507695561,507929036,508307733,508312691,508999120,509963561,510142147,510698091,510743096,510769317,510957074,511053311,511371367,511409911,511432960,511642385,511691964,511730908, Post-pr: avg 511971266.5 ns, regressed 0.88% 502744835,506502498,507735420,507929724,508313335,509548582,509994942,510107257,510715603,511046955,511352639,511458478,512117521,512317380,512766303,512972652,513059586,513804934,513808980,514059409,514187369,514389494,514447762,514616464,514622882,514641763,514666265,514716377,514990179,515502408, ``` Compaction ``` TEST_TMPDIR=/dev/shm ./db_basic_bench_{pre|post}_pr --benchmark_filter=ManualCompaction/comp_style:0/max_data:134217728/per_key_size:256/enable_statistics:1 --benchmark_repetitions=1000 -- default: 1 thread is used to run benchmark Pre-pr: avg 495346098.30 ns 492118301,493203526,494201411,494336607,495269217,495404950,496402598,497012157,497358370,498153846 Post-pr: avg 504528077.20, regressed 1.85%. "ManualCompaction" include flush so the isolated regression for compaction should be around 1.85-0.88 = 0.97% 502465338,502485945,502541789,502909283,503438601,504143885,506113087,506629423,507160414,507393007 ``` Put with WAL (in case passing WriteOptions slows down this path even without collecting SST write stats) ``` TEST_TMPDIR=/dev/shm ./db_basic_bench_pre_pr --benchmark_filter=DBPut/comp_style:0/max_data:107374182400/per_key_size:256/enable_statistics:1/wal:1 --benchmark_repetitions=1000 -- default: 1 thread is used to run benchmark Pre-pr: avg 3848.10 ns 3814,3838,3839,3848,3854,3854,3854,3860,3860,3860 Post-pr: avg 3874.20 ns, regressed 0.68% 3863,3867,3871,3874,3875,3877,3877,3877,3880,3881 ``` Pull Request resolved: https://github.com/facebook/rocksdb/pull/11910 Reviewed By: ajkr Differential Revision: D49788060 Pulled By: hx235 fbshipit-source-id: 79e73699cda5be3b66461687e5147c2484fc5eff |
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Peter Dillinger
|
02443dd93f |
Refactor, clean up, fixes, and more testing for SeqnoToTimeMapping (#11905)
Summary: This change is before a planned DBImpl change to ensure all sufficiently recent sequence numbers since Open are covered by SeqnoToTimeMapping (bug fix with existing test work-arounds). **Intended follow-up** However, I found enough issues with SeqnoToTimeMapping to warrant this PR first, including very small fixes in DB implementation related to API contract of SeqnoToTimeMapping. Functional fixes / changes: * This fixes some mishandling of boundary cases. For example, if the user decides to stop writing to DB, the last written sequence number would perpetually have its write time updated to "now" and would always be ineligible for migration to cold tier. Part of the problem is that the SeqnoToTimeMapping would return a seqno known to have been written before (immediately or otherwise) the requested time, but compaction_job.cc would include that seqno in the preserve/exclude set. That is fixed (in part) by adding one in compaction_job.cc * That problem was worse because a whole range of seqnos could be updated perpetually with new times in SeqnoToTimeMapping::Append (if no writes to DB). That logic was apparently optimized for GetOldestApproximateTime (now GetProximalTimeBeforeSeqno), which is not used in production, to the detriment of GetOldestSequenceNum (now GetProximalSeqnoBeforeTime), which is used in production. (Perhaps plans changed during development?) This is fixed in Append to optimize for accuracy of GetProximalSeqnoBeforeTime. (Unit tests added and updated.) * Related: SeqnoToTimeMapping did not have a clear contract about the relationships between seqnos and times, just the idea of a rough correspondence. Now the class description makes it clear that the write time of each recorded seqno comes before or at the associated time, to support getting best results for GetProximalSeqnoBeforeTime. And this makes it easier to make clear the contract of each API function. * Update `DBImpl::RecordSeqnoToTimeMapping()` to follow this ordering in gathering samples. Some part of these changes has required an expanded test work-around for the problem (see intended follow-up above) that the DB does not immediately ensure recent seqnos are covered by its mapping. These work-arounds will be removed with that planned work. An apparent compaction bug is revealed in PrecludeLastLevelTest::RangeDelsCauseFileEndpointsToOverlap, so that test is disabled. Filed GitHub issue #11909 Cosmetic / code safety things (not exhaustive): * Fix some confusing names. * `seqno_time_mapping` was used inconsistently in places. Now just `seqno_to_time_mapping` to correspond to class name. * Rename confusing `GetOldestSequenceNum` -> `GetProximalSeqnoBeforeTime` and `GetOldestApproximateTime` -> `GetProximalTimeBeforeSeqno`. Part of the motivation is that our times and seqnos here have the same underlying type, so we want to be clear about which is expected where to avoid mixing. * Rename `kUnknownSeqnoTime` to `kUnknownTimeBeforeAll` because the value is a bad choice for unknown if we ever add ProximalAfterBlah functions. * Arithmetic on SeqnoTimePair doesn't make sense except for delta encoding, so use better names / APIs with that in mind. * (OMG) Don't allow direct comparison between SeqnoTimePair and SequenceNumber. (There is no checking that it isn't compared against time by accident.) * A field name essentially matching the containing class name is a confusing pattern (`seqno_time_mapping_`). * Wrap calls to confusing (but useful) upper_bound and lower_bound functions to have clearer names and more code reuse. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11905 Test Plan: GetOldestSequenceNum (now GetProximalSeqnoBeforeTime) and TruncateOldEntries were lacking unit tests, despite both being used in production (experimental feature). Added those and expanded others. Reviewed By: jowlyzhang Differential Revision: D49755592 Pulled By: pdillinger fbshipit-source-id: f72a3baac74d24b963c77e538bba89a7fc8dce51 |
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|
leipeng
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bc0db33483 |
Optimize about sstableKeyCompare (#11610)
Summary: We observed `CompactionOutputs::UpdateGrandparentBoundaryInfo` consumes much time for `InternalKey::DecodeFrom` and `InternalKey::~InternalKey` in flame graph. This PR omit the InternalKey object in `CompactionOutputs::UpdateGrandparentBoundaryInfo` .  Pull Request resolved: https://github.com/facebook/rocksdb/pull/11610 Reviewed By: ajkr Differential Revision: D47426971 Pulled By: cbi42 fbshipit-source-id: f0d3a8186d778294515c0685032f5b395c4d6a62 |
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Yu Zhang
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7521478b43 |
Record the persist_user_defined_timestamps flag in manifest (#11515)
Summary: Start to record the value of the flag `AdvancedColumnFamilyOptions.persist_user_defined_timestamps` in the Manifest and table properties for a SST file when it is created. And use the recorded flag when creating a table reader for the SST file. This flag's default value is true, it is only explicitly recorded if it's false. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11515 Test Plan: ``` make all check ./version_edit_test ``` Reviewed By: ltamasi Differential Revision: D46920386 Pulled By: jowlyzhang fbshipit-source-id: 075c20363d3d2cc1368422ecc805617ed135cc26 |
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Changyu Bi
|
4aa52d89cf |
Drop range tombstone during non-bottommost compaction (#11459)
Summary: Similar to point tombstones, we can drop a range tombstone during compaction when we know its range does not exist in any higher level. This PR adds this optimization. Some existing test in db_range_del_test is fixed to work under this optimization. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11459 Test Plan: * Add unit test `DBRangeDelTest, NonBottommostCompactionDropRangetombstone`. * Ran crash test that issues range deletion for a few hours: `python3 tools/db_crashtest.py blackbox --simple --write_buffer_size=1048576 --delrangepercent=10 --writepercent=31 --readpercent=40` Reviewed By: ajkr Differential Revision: D46007904 Pulled By: cbi42 fbshipit-source-id: 3f37205b6778b7d55ed106369ca41b0632a6d0fd |
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Hui Xiao
|
8f763bdeab |
Record and use the tail size to prefetch table tail (#11406)
Summary: **Context:** We prefetch the tail part of a SST file (i.e, the blocks after data blocks till the end of the file) during each SST file open in hope to prefetch all the stuff at once ahead of time for later read e.g, footer, meta index, filter/index etc. The existing approach to estimate the tail size to prefetch is through `TailPrefetchStats` heuristics introduced in https://github.com/facebook/rocksdb/pull/4156, which has caused small reads in unlucky case (e.g, small read into the tail buffer during table open in thread 1 under the same BlockBasedTableFactory object can make thread 2's tail prefetching use a small size that it shouldn't) and is hard to debug. Therefore we decide to record the exact tail size and use it directly to prefetch tail of the SST instead of relying heuristics. **Summary:** - Obtain and record in manifest the tail size in `BlockBasedTableBuilder::Finish()` - For backward compatibility, we fall back to TailPrefetchStats and last to simple heuristics that the tail size is a linear portion of the file size - see PR conversation for more. - Make`tail_start_offset` part of the table properties and deduct tail size to record in manifest for external files (e.g, file ingestion, import CF) and db repair (with no access to manifest). Pull Request resolved: https://github.com/facebook/rocksdb/pull/11406 Test Plan: 1. New UT 2. db bench Note: db bench on /tmp/ where direct read is supported is too slow to finish and the default pinning setting in db bench is not helpful to profile # sst read of Get. Therefore I hacked the following to obtain the following comparison. ``` diff --git a/table/block_based/block_based_table_reader.cc b/table/block_based/block_based_table_reader.cc index bd5669f0f..791484c1f 100644 --- a/table/block_based/block_based_table_reader.cc +++ b/table/block_based/block_based_table_reader.cc @@ -838,7 +838,7 @@ Status BlockBasedTable::PrefetchTail( &tail_prefetch_size); // Try file system prefetch - if (!file->use_direct_io() && !force_direct_prefetch) { + if (false && !file->use_direct_io() && !force_direct_prefetch) { if (!file->Prefetch(prefetch_off, prefetch_len, ro.rate_limiter_priority) .IsNotSupported()) { prefetch_buffer->reset(new FilePrefetchBuffer( diff --git a/tools/db_bench_tool.cc b/tools/db_bench_tool.cc index ea40f5fa0..39a0ac385 100644 --- a/tools/db_bench_tool.cc +++ b/tools/db_bench_tool.cc @@ -4191,6 +4191,8 @@ class Benchmark { std::shared_ptr<TableFactory>(NewCuckooTableFactory(table_options)); } else { BlockBasedTableOptions block_based_options; + block_based_options.metadata_cache_options.partition_pinning = + PinningTier::kAll; block_based_options.checksum = static_cast<ChecksumType>(FLAGS_checksum_type); if (FLAGS_use_hash_search) { ``` Create DB ``` ./db_bench --bloom_bits=3 --use_existing_db=1 --seed=1682546046158958 --partition_index_and_filters=1 --statistics=1 -db=/dev/shm/testdb/ -benchmarks=readrandom -key_size=3200 -value_size=512 -num=1000000 -write_buffer_size=6550000 -disable_auto_compactions=false -target_file_size_base=6550000 -compression_type=none ``` ReadRandom ``` ./db_bench --bloom_bits=3 --use_existing_db=1 --seed=1682546046158958 --partition_index_and_filters=1 --statistics=1 -db=/dev/shm/testdb/ -benchmarks=readrandom -key_size=3200 -value_size=512 -num=1000000 -write_buffer_size=6550000 -disable_auto_compactions=false -target_file_size_base=6550000 -compression_type=none ``` (a) Existing (Use TailPrefetchStats for tail size + use seperate prefetch buffer in PartitionedFilter/IndexReader::CacheDependencies()) ``` rocksdb.table.open.prefetch.tail.hit COUNT : 3395 rocksdb.sst.read.micros P50 : 5.655570 P95 : 9.931396 P99 : 14.845454 P100 : 585.000000 COUNT : 999905 SUM : 6590614 ``` (b) This PR (Record tail size + use the same tail buffer in PartitionedFilter/IndexReader::CacheDependencies()) ``` rocksdb.table.open.prefetch.tail.hit COUNT : 14257 rocksdb.sst.read.micros P50 : 5.173347 P95 : 9.015017 P99 : 12.912610 P100 : 228.000000 COUNT : 998547 SUM : 5976540 ``` As we can see, we increase the prefetch tail hit count and decrease SST read count with this PR 3. Test backward compatibility by stepping through reading with post-PR code on a db generated pre-PR. Reviewed By: pdillinger Differential Revision: D45413346 Pulled By: hx235 fbshipit-source-id: 7d5e36a60a72477218f79905168d688452a4c064 |
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Hui Xiao
|
151242ce46 |
Group rocksdb.sst.read.micros stat by IOActivity flush and compaction (#11288)
Summary:
**Context:**
The existing stat rocksdb.sst.read.micros does not reflect each of compaction and flush cases but aggregate them, which is not so helpful for us to understand IO read behavior of each of them.
**Summary**
- Update `StopWatch` and `RandomAccessFileReader` to record `rocksdb.sst.read.micros` and `rocksdb.file.{flush/compaction}.read.micros`
- Fixed the default histogram in `RandomAccessFileReader`
- New field `ReadOptions/IOOptions::io_activity`; Pass `ReadOptions` through paths under db open, flush and compaction to where we can prepare `IOOptions` and pass it to `RandomAccessFileReader`
- Use `thread_status_util` for assertion in `DbStressFSWrapper` for continuous testing on we are passing correct `io_activity` under db open, flush and compaction
Pull Request resolved: https://github.com/facebook/rocksdb/pull/11288
Test Plan:
- **Stress test**
- **Db bench 1: rocksdb.sst.read.micros COUNT ≈ sum of rocksdb.file.read.flush.micros's and rocksdb.file.read.compaction.micros's.** (without blob)
- May not be exactly the same due to `HistogramStat::Add` only guarantees atomic not accuracy across threads.
```
./db_bench -db=/dev/shm/testdb/ -statistics=true -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -target_file_size_base=655 -disable_auto_compactions=false -compression_type=none -bloom_bits=3 (-use_plain_table=1 -prefix_size=10)
```
```
// BlockBasedTable
rocksdb.sst.read.micros P50 : 2.009374 P95 : 4.968548 P99 : 8.110362 P100 : 43.000000 COUNT : 40456 SUM : 114805
rocksdb.file.read.flush.micros P50 : 1.871841 P95 : 3.872407 P99 : 5.540541 P100 : 43.000000 COUNT : 2250 SUM : 6116
rocksdb.file.read.compaction.micros P50 : 2.023109 P95 : 5.029149 P99 : 8.196910 P100 : 26.000000 COUNT : 38206 SUM : 108689
// PlainTable
Does not apply
```
- **Db bench 2: performance**
**Read**
SETUP: db with 900 files
```
./db_bench -db=/dev/shm/testdb/ -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=true -target_file_size_base=655 -compression_type=none
```run till convergence
```
./db_bench -seed=1678564177044286 -use_existing_db=true -db=/dev/shm/testdb -benchmarks=readrandom[-X60] -statistics=true -num=1000000 -disable_auto_compactions=true -compression_type=none -bloom_bits=3
```
Pre-change
`readrandom [AVG 60 runs] : 21568 (± 248) ops/sec`
Post-change (no regression, -0.3%)
`readrandom [AVG 60 runs] : 21486 (± 236) ops/sec`
**Compaction/Flush**run till convergence
```
./db_bench -db=/dev/shm/testdb2/ -seed=1678564177044286 -benchmarks="fillseq[-X60]" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=false -target_file_size_base=655 -compression_type=none
rocksdb.sst.read.micros COUNT : 33820
rocksdb.sst.read.flush.micros COUNT : 1800
rocksdb.sst.read.compaction.micros COUNT : 32020
```
Pre-change
`fillseq [AVG 46 runs] : 1391 (± 214) ops/sec; 0.7 (± 0.1) MB/sec`
Post-change (no regression, ~-0.4%)
`fillseq [AVG 46 runs] : 1385 (± 216) ops/sec; 0.7 (± 0.1) MB/sec`
Reviewed By: ajkr
Differential Revision: D44007011
Pulled By: hx235
fbshipit-source-id: a54c89e4846dfc9a135389edf3f3eedfea257132
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Changyu Bi
|
229297d1b8 |
Refactor AddRangeDels() + consider range tombstone during compaction file cutting (#11113)
Summary: A second attempt after https://github.com/facebook/rocksdb/issues/10802, with bug fixes and refactoring. This PR updates compaction logic to take range tombstones into account when determining whether to cut the current compaction output file (https://github.com/facebook/rocksdb/issues/4811). Before this change, only point keys were considered, and range tombstones could cause large compactions. For example, if the current compaction outputs is a range tombstone [a, b) and 2 point keys y, z, they would be added to the same file, and may overlap with too many files in the next level and cause a large compaction in the future. This PR also includes ajkr's effort to simplify the logic to add range tombstones to compaction output files in `AddRangeDels()` ([https://github.com/facebook/rocksdb/issues/11078](https://github.com/facebook/rocksdb/pull/11078#issuecomment-1386078861)). The main change is for `CompactionIterator` to emit range tombstone start keys to be processed by `CompactionOutputs`. A new class `CompactionMergingIterator` is introduced to replace `MergingIterator` under `CompactionIterator` to enable emitting of range tombstone start keys. Further improvement after this PR include cutting compaction output at some grandparent boundary key (instead of the next output key) when cutting within a range tombstone to reduce overlap with grandparents. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11113 Test Plan: * added unit test in db_range_del_test * crash test with a small key range: `python3 tools/db_crashtest.py blackbox --simple --max_key=100 --interval=600 --write_buffer_size=262144 --target_file_size_base=256 --max_bytes_for_level_base=262144 --block_size=128 --value_size_mult=33 --subcompactions=10 --use_multiget=1 --delpercent=3 --delrangepercent=2 --verify_iterator_with_expected_state_one_in=2 --num_iterations=10` Reviewed By: ajkr Differential Revision: D42655709 Pulled By: cbi42 fbshipit-source-id: 8367e36ef5640e8f21c14a3855d4a8d6e360a34c |
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Changyu Bi
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e9d6a0d7ce |
Fix asan failure caused by range tombstone start key use-after-free (#11106)
Summary: the `last_tombstone_start_user_key` variable in `BuildTable()` and in `CompactionOutputs::AddRangeDels()` may point to a start key that is freed if user-defined timestamp is enabled. This was causing ASAN failure and this PR fixes this issue. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11106 Test Plan: Added UT for repro. Reviewed By: ajkr Differential Revision: D42590862 Pulled By: cbi42 fbshipit-source-id: c493265ececdf89636d801d55ae929806c4d4b2c |
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Changyu Bi
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4d0f9a995c |
Consider TTL compaction file cutting earlier to prevent small output file (#11075)
Summary: in `CompactionOutputs::ShouldStopBefore()`, TTL-related states, `cur_files_to_cut_for_ttl_` and `next_files_to_cut_for_ttl_`, are not updated if the function returns early. This can cause unnecessary compaction output file cuttings and hence produce smaller output files, which may hurt write amp. See the example in the unit test for how this "unnecessary file cutting" can happen. This PR fixes this issue by moving the code for updating TTL states earlier in `CompactionOutputs::ShouldStopBefore()` so that the states are updated for each key. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11075 Test Plan: - Added new unit test. Reviewed By: hx235 Differential Revision: D42398739 Pulled By: cbi42 fbshipit-source-id: 09fab66679c1a734abcfc31bcea33dd9aeb9dbc7 |
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Changyu Bi
|
6a82b68788 |
Avoid counting extra range tombstone compensated size in AddRangeDels() (#11091)
Summary: in `CompactionOutputs::AddRangeDels()`, range tombstones with the same start and end key but different sequence numbers all contribute to compensated range tombstone size. This PR removes this redundancy. This PR also includes a fix from https://github.com/facebook/rocksdb/issues/11067 where a range tombstone that is not within a file's range was being added to the file. This fixes an assertion failure for `icmp.Compare(start, end) <= 0` in VersionSet::ApproximateSize() when calculating compensated range tombstone size. Assertions and a comment/essay was added to reason that no such range tombstone will be added after this fix. Pull Request resolved: https://github.com/facebook/rocksdb/pull/11091 Test Plan: - Added unit tests - Stress test with small key range: `python3 tools/db_crashtest.py blackbox --simple --max_key=100 --interval=600 --write_buffer_size=262144 --target_file_size_base=256 --max_bytes_for_level_base=262144 --block_size=128 --value_size_mult=33 --subcompactions=10` Reviewed By: ajkr Differential Revision: D42521588 Pulled By: cbi42 fbshipit-source-id: 5bda3fe38997995314e1f7592319af12b69bc4f8 |
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Changyu Bi
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f515d9d203 |
Revert #10802 Consider range tombstone in compaction output file cutting (#11089)
Summary:
This reverts commit
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Changyu Bi
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cc6f323705 |
Include estimated bytes deleted by range tombstones in compensated file size (#10734)
Summary: compensate file sizes in compaction picking so files with range tombstones are preferred, such that they get compacted down earlier as they tend to delete a lot of data. This PR adds a `compensated_range_deletion_size` field in FileMeta that is computed during Flush/Compaction and persisted in MANIFEST. This value is added to `compensated_file_size` which will be used for compaction picking. Currently, for a file in level L, `compensated_range_deletion_size` is set to the estimated bytes deleted by range tombstone of this file in all levels > L. This helps to reduce space amp when data in older levels are covered by range tombstones in level L. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10734 Test Plan: - Added unit tests. - benchmark to check if the above definition `compensated_range_deletion_size` is reducing space amp as intended, without affecting write amp too much. The experiment set up favorable for this optimization: large range tombstone issued infrequently. Command used: ``` ./db_bench -benchmarks=fillrandom,waitforcompaction,stats,levelstats -use_existing_db=false -avoid_flush_during_recovery=true -write_buffer_size=33554432 -level_compaction_dynamic_level_bytes=true -max_background_jobs=8 -max_bytes_for_level_base=134217728 -target_file_size_base=33554432 -writes_per_range_tombstone=500000 -range_tombstone_width=5000000 -num=50000000 -benchmark_write_rate_limit=8388608 -threads=16 -duration=1800 --max_num_range_tombstones=1000000000 ``` In this experiment, each thread wrote 16 range tombstones over the duration of 30 minutes, each range tombstone has width 5M that is the 10% of the key space width. Results shows this PR generates a smaller DB size. Compaction stats from this PR: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 2/0 31.54 MB 0.5 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 63.4 135.56 110.94 544 0.249 0 0 0.0 0.0 L4 3/0 96.55 MB 0.8 18.5 6.7 11.8 18.4 6.6 0.0 2.7 65.3 64.9 290.08 284.03 108 2.686 284M 1957K 0.0 0.0 L5 15/0 404.41 MB 1.0 19.1 7.7 11.4 18.8 7.4 0.3 2.5 66.6 65.7 292.93 285.34 220 1.332 293M 3808K 0.0 0.0 L6 143/0 4.12 GB 0.0 45.0 7.5 37.5 41.6 4.1 0.0 5.5 71.2 65.9 647.00 632.66 251 2.578 739M 47M 0.0 0.0 Sum 163/0 4.64 GB 0.0 82.6 21.9 60.7 87.2 26.5 0.3 10.4 61.9 65.4 1365.58 1312.97 1123 1.216 1318M 52M 0.0 0.0 ``` Compaction stats from main: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 0/0 0.00 KB 0.0 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 60.5 142.12 115.89 569 0.250 0 0 0.0 0.0 L4 3/0 85.68 MB 1.0 17.7 6.8 10.9 17.6 6.7 0.0 2.6 62.7 62.3 289.05 281.79 112 2.581 272M 2309K 0.0 0.0 L5 11/0 293.73 MB 1.0 18.8 7.5 11.2 18.5 7.2 0.5 2.5 64.9 63.9 296.07 288.50 220 1.346 288M 4365K 0.0 0.0 L6 130/0 3.94 GB 0.0 51.5 7.6 43.9 47.9 3.9 0.0 6.3 67.2 62.4 784.95 765.92 258 3.042 848M 51M 0.0 0.0 Sum 144/0 4.31 GB 0.0 88.0 21.9 66.0 92.3 26.3 0.5 11.0 59.6 62.5 1512.19 1452.09 1159 1.305 1409M 58M 0.0 0.0``` Reviewed By: ajkr Differential Revision: D39834713 Pulled By: cbi42 fbshipit-source-id: fe9341040b8704a8fbb10cad5cf5c43e962c7e6b |
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Changyu Bi
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53b703eafe |
Fix an assertion failure in CompactionOutputs::AddRangeDels() (#11040)
Summary: the [assertion]( |
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Changyu Bi
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f02c708aa3 |
Consider range tombstone in compaction output file cutting (#10802)
Summary: This PR is the first step for Issue https://github.com/facebook/rocksdb/issues/4811. Currently compaction output files are cut at point keys, and the decision is made mainly in `CompactionOutputs::ShouldStopBefore()`. This makes it possible for range tombstones to cause large compactions that does not respect `max_compaction_bytes`. For example, we can have a large range tombstone that overlaps with too many files from the next level. Another example is when there is a gap between a range tombstone and another key. The first issue may be more acceptable, as a lot of data is deleted. This PR address the second issue by calling `ShouldStopBefore()` for range tombstone start keys. The main change is for `CompactionIterator` to emit range tombstone start keys to be processed by `CompactionOutputs`. A new `CompactionMergingIterator` is introduced and only used under `CompactionIterator` for this purpose. Further improvement after this PR include 1) cut compaction output at some grandparent boundary key instead of at the next point key or range tombstone start key and 2) cut compaction output file within a large range tombstone (it may be easier and reasonable to only do it for range tombstones at the end of a compaction output). Pull Request resolved: https://github.com/facebook/rocksdb/pull/10802 Test Plan: - added unit tests in db_range_del_test. - stress test: `python3 tools/db_crashtest.py whitebox --[simple|enable_ts] --verify_iterator_with_expected_state_one_in=5 --delrangepercent=5 --prefixpercent=2 --writepercent=58 --readpercen=21 --duration=36000 --range_deletion_width=1000000` Reviewed By: ajkr, jay-zhuang Differential Revision: D40308827 Pulled By: cbi42 fbshipit-source-id: a8fd6f70a3f09d0ef7a40e006f6c964bba8c00df |
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Jay Zhuang
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23fa5b7789 |
Use sstableKeyCompare() for compaction output boundary check (#10763)
Summary: To make it consistent with the compaction picker which uses the `sstableKeyCompare()` to pick the overlap files. For example, without this change, it may cut L1 files like: ``` L1: [2-21] [22-30] L2: [1-10] [21-30] ``` Because "21" on L1 is smaller than "21" on L2. But for compaction, these 2 files are overlapped. `sstableKeyCompare()` also take range delete into consideration which may cut file for the same key. It also makes the `max_compaction_bytes` calculation more accurate for cases like above, the overlapped bytes was under estimated. Also make sure the 2 keys won't be splitted to 2 files because of reaching `max_compaction_bytes`. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10763 Reviewed By: cbi42 Differential Revision: D39971904 Pulled By: cbi42 fbshipit-source-id: bcc309e9c3dc61a8f50667a6f633e6132c0154a8 |
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Changyu Bi
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9f2363f4c4 |
User-defined timestamp support for DeleteRange() (#10661)
Summary: Add user-defined timestamp support for range deletion. The new API is `DeleteRange(opt, cf, begin_key, end_key, ts)`. Most of the change is to update the comparator to compare without timestamp. Other than that, major changes are - internal range tombstone data structures (`FragmentedRangeTombstoneList`, `RangeTombstone`, etc.) to store timestamps. - Garbage collection of range tombstones and range tombstone covered keys during compaction. - Get()/MultiGet() to return the timestamp of a range tombstone when needed. - Get/Iterator with range tombstones bounded by readoptions.timestamp. - timestamp crash test now issues DeleteRange by default. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10661 Test Plan: - Added unit test: `make check` - Stress test: `python3 tools/db_crashtest.py --enable_ts whitebox --readpercent=57 --prefixpercent=4 --writepercent=25 -delpercent=5 --iterpercent=5 --delrangepercent=4` - Ran `db_bench` to measure regression when timestamp is not enabled. The tests are for write (with some range deletion) and iterate with DB fitting in memory: `./db_bench--benchmarks=fillrandom,seekrandom --writes_per_range_tombstone=200 --max_write_buffer_number=100 --min_write_buffer_number_to_merge=100 --writes=500000 --reads=500000 --seek_nexts=10 --disable_auto_compactions -disable_wal=true --max_num_range_tombstones=1000`. Did not see consistent regression in no timestamp case. | micros/op | fillrandom | seekrandom | | --- | --- | --- | |main| 2.58 |10.96| |PR 10661| 2.68 |10.63| Reviewed By: riversand963 Differential Revision: D39441192 Pulled By: cbi42 fbshipit-source-id: f05aca3c41605caf110daf0ff405919f300ddec2 |
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Jay Zhuang
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f3cc66632b |
Align compaction output file boundaries to the next level ones (#10655)
Summary:
Try to align the compaction output file boundaries to the next level ones
(grandparent level), to reduce the level compaction write-amplification.
In level compaction, there are "wasted" data at the beginning and end of the
output level files. Align the file boundary can avoid such "wasted" compaction.
With this PR, it tries to align the non-bottommost level file boundaries to its
next level ones. It may cut file when the file size is large enough (at least
50% of target_file_size) and not too large (2x target_file_size).
db_bench shows about 12.56% compaction reduction:
```
TEST_TMPDIR=/data/dbbench2 ./db_bench --benchmarks=fillrandom,readrandom -max_background_jobs=12 -num=400000000 -target_file_size_base=33554432
# baseline:
Flush(GB): cumulative 25.882, interval 7.216
Cumulative compaction: 285.90 GB write, 162.36 MB/s write, 269.68 GB read, 153.15 MB/s read, 2926.7 seconds
# with this change:
Flush(GB): cumulative 25.882, interval 7.753
Cumulative compaction: 249.97 GB write, 141.96 MB/s write, 233.74 GB read, 132.74 MB/s read, 2534.9 seconds
```
The compaction simulator shows a similar result (14% with 100G random data).
As a side effect, with this PR, the SST file size can exceed the
target_file_size, but is capped at 2x target_file_size. And there will be
smaller files. Here are file size statistics when loading 100GB with the target
file size 32MB:
```
baseline this_PR
count 1.656000e+03 1.705000e+03
mean 3.116062e+07 3.028076e+07
std 7.145242e+06 8.046139e+06
```
The feature is enabled by default, to revert to the old behavior disable it
with `AdvancedColumnFamilyOptions.level_compaction_dynamic_file_size = false`
Also includes https://github.com/facebook/rocksdb/issues/1963 to cut file before skippable grandparent file. Which is for
use case like user adding 2 or more non-overlapping data range at the same
time, it can reduce the overlapping of 2 datasets in the lower levels.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/10655
Reviewed By: cbi42
Differential Revision: D39552321
Pulled By: jay-zhuang
fbshipit-source-id: 640d15f159ab0cd973f2426cfc3af266fc8bdde2
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Jay Zhuang
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849cf1bf68 |
Refactor Compaction file cut ShouldStopBefore() (#10629)
Summary: Consolidate compaction output cut logic to `ShouldStopBefore()` and move it inside of CompactionOutputs class. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10629 Reviewed By: cbi42 Differential Revision: D39315536 Pulled By: jay-zhuang fbshipit-source-id: 7d81037babbd35c276bbaad02dbc2bb555fdac18 |
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Jay Zhuang
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a3acf2ef87 |
Add seqno to time mapping (#10338)
Summary: Which will be used for tiered storage to preclude hot data from compacting to the cold tier (the last level). Internally, adding seqno to time mapping. A periodic_task is scheduled to record the current_seqno -> current_time in certain cadence. When memtable flush, the mapping informaiton is stored in sstable property. During compaction, the mapping information are merged and get the approximate time of sequence number, which is used to determine if a key is recently inserted or not and preclude it from the last level if it's recently inserted (within the `preclude_last_level_data_seconds`). Pull Request resolved: https://github.com/facebook/rocksdb/pull/10338 Test Plan: CI Reviewed By: siying Differential Revision: D37810187 Pulled By: jay-zhuang fbshipit-source-id: 6953be7a18a99de8b1cb3b162d712f79c2b4899f |
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Jay Zhuang
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6ce0b2ca34 |
Tiered Compaction: per key placement support (#9964)
Summary: Support per_key_placement for last level compaction, which will be used for tiered compaction. * compaction iterator reports which level a key should output to; * compaction get the output level information and check if it's safe to output the data to penultimate level; * all compaction output files will be installed. * extra internal compaction stats added for penultimate level. Pull Request resolved: https://github.com/facebook/rocksdb/pull/9964 Test Plan: * Unittest * db_bench, no significate difference: https://gist.github.com/jay-zhuang/3645f8fb97ec0ab47c10704bb39fd6e4 * microbench manual compaction no significate difference: https://gist.github.com/jay-zhuang/ba679b3e89e24992615ee9eef310e6dd * run the db_stress multiple times (not covering the new feature) looks good (internal: https://fburl.com/sandcastle/9w84pp2m) Reviewed By: ajkr Differential Revision: D36249494 Pulled By: jay-zhuang fbshipit-source-id: a96da57c8031c1df83e4a7a8567b657a112b80a3 |