rocksdb/db/experimental.cc

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// Copyright (c) 2011-present, Facebook, Inc. All rights reserved.
// This source code is licensed under both the GPLv2 (found in the
// COPYING file in the root directory) and Apache 2.0 License
// (found in the LICENSE.Apache file in the root directory).
#include "rocksdb/experimental.h"
#include "db/db_impl/db_impl.h"
Add manifest fix-up utility for file temperatures (#9683) Summary: The goal of this change is to allow changes to the "current" (in FileSystem) file temperatures to feed back into DB metadata, so that they can inform decisions and stats reporting. In part because of modular code factoring, it doesn't seem easy to do this automagically, where opening an SST file and observing current Temperature different from expected would trigger a change in metadata and DB manifest write (essentially giving the deep read path access to the write path). It is also difficult to do this while the DB is open because of the limitations of LogAndApply. This change allows updating file temperature metadata on a closed DB using an experimental utility function UpdateManifestForFilesState() or `ldb update_manifest --update_temperatures`. This should suffice for "migration" scenarios where outside tooling has placed or re-arranged DB files into a (different) tiered configuration without going through RocksDB itself (currently, only compaction can change temperature metadata). Some details: * Refactored and added unit test for `ldb unsafe_remove_sst_file` because of shared functionality * Pulled in autovector.h changes from https://github.com/facebook/rocksdb/issues/9546 to fix SuperVersionContext move constructor (related to an older draft of this change) Possible follow-up work: * Support updating manifest with file checksums, such as when a new checksum function is used and want existing DB metadata updated for it. * It's possible that for some repair scenarios, lighter weight than full repair, we might want to support UpdateManifestForFilesState() to modify critical file details like size or checksum using same algorithm. But let's make sure these are differentiated from modifying file details in ways that don't suspect corruption (or require extreme trust). Pull Request resolved: https://github.com/facebook/rocksdb/pull/9683 Test Plan: unit tests added Reviewed By: jay-zhuang Differential Revision: D34798828 Pulled By: pdillinger fbshipit-source-id: cfd83e8fb10761d8c9e7f9c020d68c9106a95554
2022-03-18 23:35:51 +00:00
#include "db/version_util.h"
#include "logging/logging.h"
namespace ROCKSDB_NAMESPACE {
namespace experimental {
Status SuggestCompactRange(DB* db, ColumnFamilyHandle* column_family,
const Slice* begin, const Slice* end) {
if (db == nullptr) {
return Status::InvalidArgument("DB is empty");
}
return db->SuggestCompactRange(column_family, begin, end);
}
Status PromoteL0(DB* db, ColumnFamilyHandle* column_family, int target_level) {
if (db == nullptr) {
return Status::InvalidArgument("Didn't recognize DB object");
}
return db->PromoteL0(column_family, target_level);
}
Status SuggestCompactRange(DB* db, const Slice* begin, const Slice* end) {
return SuggestCompactRange(db, db->DefaultColumnFamily(), begin, end);
}
Add manifest fix-up utility for file temperatures (#9683) Summary: The goal of this change is to allow changes to the "current" (in FileSystem) file temperatures to feed back into DB metadata, so that they can inform decisions and stats reporting. In part because of modular code factoring, it doesn't seem easy to do this automagically, where opening an SST file and observing current Temperature different from expected would trigger a change in metadata and DB manifest write (essentially giving the deep read path access to the write path). It is also difficult to do this while the DB is open because of the limitations of LogAndApply. This change allows updating file temperature metadata on a closed DB using an experimental utility function UpdateManifestForFilesState() or `ldb update_manifest --update_temperatures`. This should suffice for "migration" scenarios where outside tooling has placed or re-arranged DB files into a (different) tiered configuration without going through RocksDB itself (currently, only compaction can change temperature metadata). Some details: * Refactored and added unit test for `ldb unsafe_remove_sst_file` because of shared functionality * Pulled in autovector.h changes from https://github.com/facebook/rocksdb/issues/9546 to fix SuperVersionContext move constructor (related to an older draft of this change) Possible follow-up work: * Support updating manifest with file checksums, such as when a new checksum function is used and want existing DB metadata updated for it. * It's possible that for some repair scenarios, lighter weight than full repair, we might want to support UpdateManifestForFilesState() to modify critical file details like size or checksum using same algorithm. But let's make sure these are differentiated from modifying file details in ways that don't suspect corruption (or require extreme trust). Pull Request resolved: https://github.com/facebook/rocksdb/pull/9683 Test Plan: unit tests added Reviewed By: jay-zhuang Differential Revision: D34798828 Pulled By: pdillinger fbshipit-source-id: cfd83e8fb10761d8c9e7f9c020d68c9106a95554
2022-03-18 23:35:51 +00:00
Status UpdateManifestForFilesState(
const DBOptions& db_opts, const std::string& db_name,
const std::vector<ColumnFamilyDescriptor>& column_families,
const UpdateManifestForFilesStateOptions& opts) {
Group rocksdb.sst.read.micros stat by IOActivity flush and compaction (#11288) Summary: **Context:** The existing stat rocksdb.sst.read.micros does not reflect each of compaction and flush cases but aggregate them, which is not so helpful for us to understand IO read behavior of each of them. **Summary** - Update `StopWatch` and `RandomAccessFileReader` to record `rocksdb.sst.read.micros` and `rocksdb.file.{flush/compaction}.read.micros` - Fixed the default histogram in `RandomAccessFileReader` - New field `ReadOptions/IOOptions::io_activity`; Pass `ReadOptions` through paths under db open, flush and compaction to where we can prepare `IOOptions` and pass it to `RandomAccessFileReader` - Use `thread_status_util` for assertion in `DbStressFSWrapper` for continuous testing on we are passing correct `io_activity` under db open, flush and compaction Pull Request resolved: https://github.com/facebook/rocksdb/pull/11288 Test Plan: - **Stress test** - **Db bench 1: rocksdb.sst.read.micros COUNT ≈ sum of rocksdb.file.read.flush.micros's and rocksdb.file.read.compaction.micros's.** (without blob) - May not be exactly the same due to `HistogramStat::Add` only guarantees atomic not accuracy across threads. ``` ./db_bench -db=/dev/shm/testdb/ -statistics=true -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -target_file_size_base=655 -disable_auto_compactions=false -compression_type=none -bloom_bits=3 (-use_plain_table=1 -prefix_size=10) ``` ``` // BlockBasedTable rocksdb.sst.read.micros P50 : 2.009374 P95 : 4.968548 P99 : 8.110362 P100 : 43.000000 COUNT : 40456 SUM : 114805 rocksdb.file.read.flush.micros P50 : 1.871841 P95 : 3.872407 P99 : 5.540541 P100 : 43.000000 COUNT : 2250 SUM : 6116 rocksdb.file.read.compaction.micros P50 : 2.023109 P95 : 5.029149 P99 : 8.196910 P100 : 26.000000 COUNT : 38206 SUM : 108689 // PlainTable Does not apply ``` - **Db bench 2: performance** **Read** SETUP: db with 900 files ``` ./db_bench -db=/dev/shm/testdb/ -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=true -target_file_size_base=655 -compression_type=none ```run till convergence ``` ./db_bench -seed=1678564177044286 -use_existing_db=true -db=/dev/shm/testdb -benchmarks=readrandom[-X60] -statistics=true -num=1000000 -disable_auto_compactions=true -compression_type=none -bloom_bits=3 ``` Pre-change `readrandom [AVG 60 runs] : 21568 (± 248) ops/sec` Post-change (no regression, -0.3%) `readrandom [AVG 60 runs] : 21486 (± 236) ops/sec` **Compaction/Flush**run till convergence ``` ./db_bench -db=/dev/shm/testdb2/ -seed=1678564177044286 -benchmarks="fillseq[-X60]" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=false -target_file_size_base=655 -compression_type=none rocksdb.sst.read.micros COUNT : 33820 rocksdb.sst.read.flush.micros COUNT : 1800 rocksdb.sst.read.compaction.micros COUNT : 32020 ``` Pre-change `fillseq [AVG 46 runs] : 1391 (± 214) ops/sec; 0.7 (± 0.1) MB/sec` Post-change (no regression, ~-0.4%) `fillseq [AVG 46 runs] : 1385 (± 216) ops/sec; 0.7 (± 0.1) MB/sec` Reviewed By: ajkr Differential Revision: D44007011 Pulled By: hx235 fbshipit-source-id: a54c89e4846dfc9a135389edf3f3eedfea257132
2023-04-21 16:07:18 +00:00
// TODO: plumb Env::IOActivity
const ReadOptions read_options;
Add manifest fix-up utility for file temperatures (#9683) Summary: The goal of this change is to allow changes to the "current" (in FileSystem) file temperatures to feed back into DB metadata, so that they can inform decisions and stats reporting. In part because of modular code factoring, it doesn't seem easy to do this automagically, where opening an SST file and observing current Temperature different from expected would trigger a change in metadata and DB manifest write (essentially giving the deep read path access to the write path). It is also difficult to do this while the DB is open because of the limitations of LogAndApply. This change allows updating file temperature metadata on a closed DB using an experimental utility function UpdateManifestForFilesState() or `ldb update_manifest --update_temperatures`. This should suffice for "migration" scenarios where outside tooling has placed or re-arranged DB files into a (different) tiered configuration without going through RocksDB itself (currently, only compaction can change temperature metadata). Some details: * Refactored and added unit test for `ldb unsafe_remove_sst_file` because of shared functionality * Pulled in autovector.h changes from https://github.com/facebook/rocksdb/issues/9546 to fix SuperVersionContext move constructor (related to an older draft of this change) Possible follow-up work: * Support updating manifest with file checksums, such as when a new checksum function is used and want existing DB metadata updated for it. * It's possible that for some repair scenarios, lighter weight than full repair, we might want to support UpdateManifestForFilesState() to modify critical file details like size or checksum using same algorithm. But let's make sure these are differentiated from modifying file details in ways that don't suspect corruption (or require extreme trust). Pull Request resolved: https://github.com/facebook/rocksdb/pull/9683 Test Plan: unit tests added Reviewed By: jay-zhuang Differential Revision: D34798828 Pulled By: pdillinger fbshipit-source-id: cfd83e8fb10761d8c9e7f9c020d68c9106a95554
2022-03-18 23:35:51 +00:00
OfflineManifestWriter w(db_opts, db_name);
Status s = w.Recover(column_families);
size_t files_updated = 0;
size_t cfs_updated = 0;
auto fs = db_opts.env->GetFileSystem();
for (auto cfd : *w.Versions().GetColumnFamilySet()) {
if (!s.ok()) {
break;
}
assert(cfd);
if (cfd->IsDropped() || !cfd->initialized()) {
continue;
}
const auto* current = cfd->current();
assert(current);
const auto* vstorage = current->storage_info();
assert(vstorage);
VersionEdit edit;
edit.SetColumnFamily(cfd->GetID());
/* SST files */
for (int level = 0; level < cfd->NumberLevels(); level++) {
if (!s.ok()) {
break;
}
const auto& level_files = vstorage->LevelFiles(level);
for (const auto& lf : level_files) {
assert(lf);
uint64_t number = lf->fd.GetNumber();
std::string fname =
TableFileName(w.IOptions().db_paths, number, lf->fd.GetPathId());
std::unique_ptr<FSSequentialFile> f;
FileOptions fopts;
// Use kUnknown to signal the FileSystem to search all tiers for the
// file.
fopts.temperature = Temperature::kUnknown;
Add manifest fix-up utility for file temperatures (#9683) Summary: The goal of this change is to allow changes to the "current" (in FileSystem) file temperatures to feed back into DB metadata, so that they can inform decisions and stats reporting. In part because of modular code factoring, it doesn't seem easy to do this automagically, where opening an SST file and observing current Temperature different from expected would trigger a change in metadata and DB manifest write (essentially giving the deep read path access to the write path). It is also difficult to do this while the DB is open because of the limitations of LogAndApply. This change allows updating file temperature metadata on a closed DB using an experimental utility function UpdateManifestForFilesState() or `ldb update_manifest --update_temperatures`. This should suffice for "migration" scenarios where outside tooling has placed or re-arranged DB files into a (different) tiered configuration without going through RocksDB itself (currently, only compaction can change temperature metadata). Some details: * Refactored and added unit test for `ldb unsafe_remove_sst_file` because of shared functionality * Pulled in autovector.h changes from https://github.com/facebook/rocksdb/issues/9546 to fix SuperVersionContext move constructor (related to an older draft of this change) Possible follow-up work: * Support updating manifest with file checksums, such as when a new checksum function is used and want existing DB metadata updated for it. * It's possible that for some repair scenarios, lighter weight than full repair, we might want to support UpdateManifestForFilesState() to modify critical file details like size or checksum using same algorithm. But let's make sure these are differentiated from modifying file details in ways that don't suspect corruption (or require extreme trust). Pull Request resolved: https://github.com/facebook/rocksdb/pull/9683 Test Plan: unit tests added Reviewed By: jay-zhuang Differential Revision: D34798828 Pulled By: pdillinger fbshipit-source-id: cfd83e8fb10761d8c9e7f9c020d68c9106a95554
2022-03-18 23:35:51 +00:00
IOStatus file_ios =
fs->NewSequentialFile(fname, fopts, &f, /*dbg*/ nullptr);
if (file_ios.ok()) {
if (opts.update_temperatures) {
Temperature temp = f->GetTemperature();
if (temp != Temperature::kUnknown && temp != lf->temperature) {
// Current state inconsistent with manifest
++files_updated;
edit.DeleteFile(level, number);
edit.AddFile(
level, number, lf->fd.GetPathId(), lf->fd.GetFileSize(),
lf->smallest, lf->largest, lf->fd.smallest_seqno,
lf->fd.largest_seqno, lf->marked_for_compaction, temp,
lf->oldest_blob_file_number, lf->oldest_ancester_time,
Sort L0 files by newly introduced epoch_num (#10922) Summary: **Context:** Sorting L0 files by `largest_seqno` has at least two inconvenience: - File ingestion and compaction involving ingested files can create files of overlapping seqno range with the existing files. `force_consistency_check=true` will catch such overlap seqno range even those harmless overlap. - For example, consider the following sequence of events ("key@n" indicates key at seqno "n") - insert k1@1 to memtable m1 - ingest file s1 with k2@2, ingest file s2 with k3@3 - insert k4@4 to m1 - compact files s1, s2 and result in new file s3 of seqno range [2, 3] - flush m1 and result in new file s4 of seqno range [1, 4]. And `force_consistency_check=true` will think s4 and s3 has file reordering corruption that might cause retuning an old value of k1 - However such caught corruption is a false positive since s1, s2 will not have overlapped keys with k1 or whatever inserted into m1 before ingest file s1 by the requirement of file ingestion (otherwise the m1 will be flushed first before any of the file ingestion completes). Therefore there in fact isn't any file reordering corruption. - Single delete can decrease a file's largest seqno and ordering by `largest_seqno` can introduce a wrong ordering hence file reordering corruption - For example, consider the following sequence of events ("key@n" indicates key at seqno "n", Credit to ajkr for this example) - an existing SST s1 contains only k1@1 - insert k1@2 to memtable m1 - ingest file s2 with k3@3, ingest file s3 with k4@4 - insert single delete k5@5 in m1 - flush m1 and result in new file s4 of seqno range [2, 5] - compact s1, s2, s3 and result in new file s5 of seqno range [1, 4] - compact s4 and result in new file s6 of seqno range [2] due to single delete - By the last step, we have file ordering by largest seqno (">" means "newer") : s5 > s6 while s6 contains a newer version of the k1's value (i.e, k1@2) than s5, which is a real reordering corruption. While this can be caught by `force_consistency_check=true`, there isn't a good way to prevent this from happening if ordering by `largest_seqno` Therefore, we are redesigning the sorting criteria of L0 files and avoid above inconvenience. Credit to ajkr , we now introduce `epoch_num` which describes the order of a file being flushed or ingested/imported (compaction output file will has the minimum `epoch_num` among input files'). This will avoid the above inconvenience in the following ways: - In the first case above, there will no longer be overlap seqno range check in `force_consistency_check=true` but `epoch_number` ordering check. This will result in file ordering s1 < s2 < s4 (pre-compaction) and s3 < s4 (post-compaction) which won't trigger false positive corruption. See test class `DBCompactionTestL0FilesMisorderCorruption*` for more. - In the second case above, this will result in file ordering s1 < s2 < s3 < s4 (pre-compacting s1, s2, s3), s5 < s4 (post-compacting s1, s2, s3), s5 < s6 (post-compacting s4), which are correct file ordering without causing any corruption. **Summary:** - Introduce `epoch_number` stored per `ColumnFamilyData` and sort CF's L0 files by their assigned `epoch_number` instead of `largest_seqno`. - `epoch_number` is increased and assigned upon `VersionEdit::AddFile()` for flush (or similarly for WriteLevel0TableForRecovery) and file ingestion (except for allow_behind_true, which will always get assigned as the `kReservedEpochNumberForFileIngestedBehind`) - Compaction output file is assigned with the minimum `epoch_number` among input files' - Refit level: reuse refitted file's epoch_number - Other paths needing `epoch_number` treatment: - Import column families: reuse file's epoch_number if exists. If not, assign one based on `NewestFirstBySeqNo` - Repair: reuse file's epoch_number if exists. If not, assign one based on `NewestFirstBySeqNo`. - Assigning new epoch_number to a file and adding this file to LSM tree should be atomic. This is guaranteed by us assigning epoch_number right upon `VersionEdit::AddFile()` where this version edit will be apply to LSM tree shape right after by holding the db mutex (e.g, flush, file ingestion, import column family) or by there is only 1 ongoing edit per CF (e.g, WriteLevel0TableForRecovery, Repair). - Assigning the minimum input epoch number to compaction output file won't misorder L0 files (even through later `Refit(target_level=0)`). It's due to for every key "k" in the input range, a legit compaction will cover a continuous epoch number range of that key. As long as we assign the key "k" the minimum input epoch number, it won't become newer or older than the versions of this key that aren't included in this compaction hence no misorder. - Persist `epoch_number` of each file in manifest and recover `epoch_number` on db recovery - Backward compatibility with old db without `epoch_number` support is guaranteed by assigning `epoch_number` to recovered files by `NewestFirstBySeqno` order. See `VersionStorageInfo::RecoverEpochNumbers()` for more - Forward compatibility with manifest is guaranteed by flexibility of `NewFileCustomTag` - Replace `force_consistent_check` on L0 with `epoch_number` and remove false positive check like case 1 with `largest_seqno` above - Due to backward compatibility issue, we might encounter files with missing epoch number at the beginning of db recovery. We will still use old L0 sorting mechanism (`NewestFirstBySeqno`) to check/sort them till we infer their epoch number. See usages of `EpochNumberRequirement`. - Remove fix https://github.com/facebook/rocksdb/pull/5958#issue-511150930 and their outdated tests to file reordering corruption because such fix can be replaced by this PR. - Misc: - update existing tests with `epoch_number` so make check will pass - update https://github.com/facebook/rocksdb/pull/5958#issue-511150930 tests to verify corruption is fixed using `epoch_number` and cover universal/fifo compaction/CompactRange/CompactFile cases - assert db_mutex is held for a few places before calling ColumnFamilyData::NewEpochNumber() Pull Request resolved: https://github.com/facebook/rocksdb/pull/10922 Test Plan: - `make check` - New unit tests under `db/db_compaction_test.cc`, `db/db_test2.cc`, `db/version_builder_test.cc`, `db/repair_test.cc` - Updated tests (i.e, `DBCompactionTestL0FilesMisorderCorruption*`) under https://github.com/facebook/rocksdb/pull/5958#issue-511150930 - [Ongoing] Compatibility test: manually run https://github.com/ajkr/rocksdb/commit/36a5686ec012f35a4371e409aa85c404ca1c210d (with file ingestion off for running the `.orig` binary to prevent this bug affecting upgrade/downgrade formality checking) for 1 hour on `simple black/white box`, `cf_consistency/txn/enable_ts with whitebox + test_best_efforts_recovery with blackbox` - [Ongoing] normal db stress test - [Ongoing] db stress test with aggressive value https://github.com/facebook/rocksdb/pull/10761 Reviewed By: ajkr Differential Revision: D41063187 Pulled By: hx235 fbshipit-source-id: 826cb23455de7beaabe2d16c57682a82733a32a9
2022-12-13 21:29:37 +00:00
lf->file_creation_time, lf->epoch_number, lf->file_checksum,
Include estimated bytes deleted by range tombstones in compensated file size (#10734) Summary: compensate file sizes in compaction picking so files with range tombstones are preferred, such that they get compacted down earlier as they tend to delete a lot of data. This PR adds a `compensated_range_deletion_size` field in FileMeta that is computed during Flush/Compaction and persisted in MANIFEST. This value is added to `compensated_file_size` which will be used for compaction picking. Currently, for a file in level L, `compensated_range_deletion_size` is set to the estimated bytes deleted by range tombstone of this file in all levels > L. This helps to reduce space amp when data in older levels are covered by range tombstones in level L. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10734 Test Plan: - Added unit tests. - benchmark to check if the above definition `compensated_range_deletion_size` is reducing space amp as intended, without affecting write amp too much. The experiment set up favorable for this optimization: large range tombstone issued infrequently. Command used: ``` ./db_bench -benchmarks=fillrandom,waitforcompaction,stats,levelstats -use_existing_db=false -avoid_flush_during_recovery=true -write_buffer_size=33554432 -level_compaction_dynamic_level_bytes=true -max_background_jobs=8 -max_bytes_for_level_base=134217728 -target_file_size_base=33554432 -writes_per_range_tombstone=500000 -range_tombstone_width=5000000 -num=50000000 -benchmark_write_rate_limit=8388608 -threads=16 -duration=1800 --max_num_range_tombstones=1000000000 ``` In this experiment, each thread wrote 16 range tombstones over the duration of 30 minutes, each range tombstone has width 5M that is the 10% of the key space width. Results shows this PR generates a smaller DB size. Compaction stats from this PR: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 2/0 31.54 MB 0.5 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 63.4 135.56 110.94 544 0.249 0 0 0.0 0.0 L4 3/0 96.55 MB 0.8 18.5 6.7 11.8 18.4 6.6 0.0 2.7 65.3 64.9 290.08 284.03 108 2.686 284M 1957K 0.0 0.0 L5 15/0 404.41 MB 1.0 19.1 7.7 11.4 18.8 7.4 0.3 2.5 66.6 65.7 292.93 285.34 220 1.332 293M 3808K 0.0 0.0 L6 143/0 4.12 GB 0.0 45.0 7.5 37.5 41.6 4.1 0.0 5.5 71.2 65.9 647.00 632.66 251 2.578 739M 47M 0.0 0.0 Sum 163/0 4.64 GB 0.0 82.6 21.9 60.7 87.2 26.5 0.3 10.4 61.9 65.4 1365.58 1312.97 1123 1.216 1318M 52M 0.0 0.0 ``` Compaction stats from main: ``` Level Files Size Score Read(GB) Rn(GB) Rnp1(GB) Write(GB) Wnew(GB) Moved(GB) W-Amp Rd(MB/s) Wr(MB/s) Comp(sec) CompMergeCPU(sec) Comp(cnt) Avg(sec) KeyIn KeyDrop Rblob(GB) Wblob(GB) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ L0 0/0 0.00 KB 0.0 0.0 0.0 0.0 8.4 8.4 0.0 1.0 0.0 60.5 142.12 115.89 569 0.250 0 0 0.0 0.0 L4 3/0 85.68 MB 1.0 17.7 6.8 10.9 17.6 6.7 0.0 2.6 62.7 62.3 289.05 281.79 112 2.581 272M 2309K 0.0 0.0 L5 11/0 293.73 MB 1.0 18.8 7.5 11.2 18.5 7.2 0.5 2.5 64.9 63.9 296.07 288.50 220 1.346 288M 4365K 0.0 0.0 L6 130/0 3.94 GB 0.0 51.5 7.6 43.9 47.9 3.9 0.0 6.3 67.2 62.4 784.95 765.92 258 3.042 848M 51M 0.0 0.0 Sum 144/0 4.31 GB 0.0 88.0 21.9 66.0 92.3 26.3 0.5 11.0 59.6 62.5 1512.19 1452.09 1159 1.305 1409M 58M 0.0 0.0``` Reviewed By: ajkr Differential Revision: D39834713 Pulled By: cbi42 fbshipit-source-id: fe9341040b8704a8fbb10cad5cf5c43e962c7e6b
2022-12-29 21:28:24 +00:00
lf->file_checksum_func_name, lf->unique_id,
lf->compensated_range_deletion_size, lf->tail_size,
lf->user_defined_timestamps_persisted);
Add manifest fix-up utility for file temperatures (#9683) Summary: The goal of this change is to allow changes to the "current" (in FileSystem) file temperatures to feed back into DB metadata, so that they can inform decisions and stats reporting. In part because of modular code factoring, it doesn't seem easy to do this automagically, where opening an SST file and observing current Temperature different from expected would trigger a change in metadata and DB manifest write (essentially giving the deep read path access to the write path). It is also difficult to do this while the DB is open because of the limitations of LogAndApply. This change allows updating file temperature metadata on a closed DB using an experimental utility function UpdateManifestForFilesState() or `ldb update_manifest --update_temperatures`. This should suffice for "migration" scenarios where outside tooling has placed or re-arranged DB files into a (different) tiered configuration without going through RocksDB itself (currently, only compaction can change temperature metadata). Some details: * Refactored and added unit test for `ldb unsafe_remove_sst_file` because of shared functionality * Pulled in autovector.h changes from https://github.com/facebook/rocksdb/issues/9546 to fix SuperVersionContext move constructor (related to an older draft of this change) Possible follow-up work: * Support updating manifest with file checksums, such as when a new checksum function is used and want existing DB metadata updated for it. * It's possible that for some repair scenarios, lighter weight than full repair, we might want to support UpdateManifestForFilesState() to modify critical file details like size or checksum using same algorithm. But let's make sure these are differentiated from modifying file details in ways that don't suspect corruption (or require extreme trust). Pull Request resolved: https://github.com/facebook/rocksdb/pull/9683 Test Plan: unit tests added Reviewed By: jay-zhuang Differential Revision: D34798828 Pulled By: pdillinger fbshipit-source-id: cfd83e8fb10761d8c9e7f9c020d68c9106a95554
2022-03-18 23:35:51 +00:00
}
}
} else {
s = file_ios;
break;
}
}
}
if (s.ok() && edit.NumEntries() > 0) {
Sync dir containing CURRENT after RenameFile on CURRENT as much as possible (#10573) Summary: **Context:** Below crash test revealed a bug that directory containing CURRENT file (short for `dir_contains_current_file` below) was not always get synced after a new CURRENT is created and being called with `RenameFile` as part of the creation. This bug exposes a risk that such un-synced directory containing the updated CURRENT can’t survive a host crash (e.g, power loss) hence get corrupted. This then will be followed by a recovery from a corrupted CURRENT that we don't want. The root-cause is that a nullptr `FSDirectory* dir_contains_current_file` sometimes gets passed-down to `SetCurrentFile()` hence in those case `dir_contains_current_file->FSDirectory::FsyncWithDirOptions()` will be skipped (which otherwise will internally call`Env/FS::SyncDic()` ) ``` ./db_stress --acquire_snapshot_one_in=10000 --adaptive_readahead=1 --allow_data_in_errors=True --avoid_unnecessary_blocking_io=0 --backup_max_size=104857600 --backup_one_in=100000 --batch_protection_bytes_per_key=8 --block_size=16384 --bloom_bits=134.8015470676662 --bottommost_compression_type=disable --cache_size=8388608 --checkpoint_one_in=1000000 --checksum_type=kCRC32c --clear_column_family_one_in=0 --compact_files_one_in=1000000 --compact_range_one_in=1000000 --compaction_pri=2 --compaction_ttl=100 --compression_max_dict_buffer_bytes=511 --compression_max_dict_bytes=16384 --compression_type=zstd --compression_use_zstd_dict_trainer=1 --compression_zstd_max_train_bytes=65536 --continuous_verification_interval=0 --data_block_index_type=0 --db=$db --db_write_buffer_size=1048576 --delpercent=5 --delrangepercent=0 --destroy_db_initially=0 --disable_wal=0 --enable_compaction_filter=0 --enable_pipelined_write=1 --expected_values_dir=$exp --fail_if_options_file_error=1 --file_checksum_impl=none --flush_one_in=1000000 --get_current_wal_file_one_in=0 --get_live_files_one_in=1000000 --get_property_one_in=1000000 --get_sorted_wal_files_one_in=0 --index_block_restart_interval=4 --ingest_external_file_one_in=0 --iterpercent=10 --key_len_percent_dist=1,30,69 --level_compaction_dynamic_level_bytes=True --mark_for_compaction_one_file_in=10 --max_background_compactions=20 --max_bytes_for_level_base=10485760 --max_key=10000 --max_key_len=3 --max_manifest_file_size=16384 --max_write_batch_group_size_bytes=64 --max_write_buffer_number=3 --max_write_buffer_size_to_maintain=0 --memtable_prefix_bloom_size_ratio=0.001 --memtable_protection_bytes_per_key=1 --memtable_whole_key_filtering=1 --mmap_read=1 --nooverwritepercent=1 --open_metadata_write_fault_one_in=0 --open_read_fault_one_in=0 --open_write_fault_one_in=0 --ops_per_thread=100000000 --optimize_filters_for_memory=1 --paranoid_file_checks=1 --partition_pinning=2 --pause_background_one_in=1000000 --periodic_compaction_seconds=0 --prefix_size=5 --prefixpercent=5 --prepopulate_block_cache=1 --progress_reports=0 --read_fault_one_in=1000 --readpercent=45 --recycle_log_file_num=0 --reopen=0 --ribbon_starting_level=999 --secondary_cache_fault_one_in=32 --secondary_cache_uri=compressed_secondary_cache://capacity=8388608 --set_options_one_in=10000 --snapshot_hold_ops=100000 --sst_file_manager_bytes_per_sec=0 --sst_file_manager_bytes_per_truncate=0 --subcompactions=3 --sync_fault_injection=1 --target_file_size_base=2097 --target_file_size_multiplier=2 --test_batches_snapshots=1 --top_level_index_pinning=1 --use_full_merge_v1=1 --use_merge=1 --value_size_mult=32 --verify_checksum=1 --verify_checksum_one_in=1000000 --verify_db_one_in=100000 --verify_sst_unique_id_in_manifest=1 --wal_bytes_per_sync=524288 --write_buffer_size=4194 --writepercent=35 ``` ``` stderr: WARNING: prefix_size is non-zero but memtablerep != prefix_hash db_stress: utilities/fault_injection_fs.cc:748: virtual rocksdb::IOStatus rocksdb::FaultInjectionTestFS::RenameFile(const std::string &, const std::string &, const rocksdb::IOOptions &, rocksdb::IODebugContext *): Assertion `tlist.find(tdn.second) == tlist.end()' failed.` ``` **Summary:** The PR ensured the non-test path pass down a non-null dir containing CURRENT (which is by current RocksDB assumption just db_dir) by doing the following: - Renamed `directory_to_fsync` as `dir_contains_current_file` in `SetCurrentFile()` to tighten the association between this directory and CURRENT file - Changed `SetCurrentFile()` API to require `dir_contains_current_file` being passed-in, instead of making it by default nullptr. - Because `SetCurrentFile()`'s `dir_contains_current_file` is passed down from `VersionSet::LogAndApply()` then `VersionSet::ProcessManifestWrites()` (i.e, think about this as a chain of 3 functions related to MANIFEST update), these 2 functions also got refactored to require `dir_contains_current_file` - Updated the non-test-path callers of these 3 functions to obtain and pass in non-nullptr `dir_contains_current_file`, which by current assumption of RocksDB, is the `FSDirectory* db_dir`. - `db_impl` path will obtain `DBImpl::directories_.getDbDir()` while others with no access to such `directories_` are obtained on the fly by creating such object `FileSystem::NewDirectory(..)` and manage it by unique pointers to ensure short life time. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10573 Test Plan: - `make check` - Passed the repro db_stress command - For future improvement, since we currently don't assert dir containing CURRENT to be non-nullptr due to https://github.com/facebook/rocksdb/pull/10573#pullrequestreview-1087698899, there is still chances that future developers mistakenly pass down nullptr dir containing CURRENT thus resulting skipped sync dir and cause the bug again. Therefore a smarter test (e.g, such as quoted from ajkr "(make) unsynced data loss to be dropping files corresponding to unsynced directory entries") is still needed. Reviewed By: ajkr Differential Revision: D39005886 Pulled By: hx235 fbshipit-source-id: 336fb9090d0cfa6ca3dd580db86268007dde7f5a
2022-08-30 00:35:21 +00:00
std::unique_ptr<FSDirectory> db_dir;
s = fs->NewDirectory(db_name, IOOptions(), &db_dir, nullptr);
if (s.ok()) {
Group rocksdb.sst.read.micros stat by IOActivity flush and compaction (#11288) Summary: **Context:** The existing stat rocksdb.sst.read.micros does not reflect each of compaction and flush cases but aggregate them, which is not so helpful for us to understand IO read behavior of each of them. **Summary** - Update `StopWatch` and `RandomAccessFileReader` to record `rocksdb.sst.read.micros` and `rocksdb.file.{flush/compaction}.read.micros` - Fixed the default histogram in `RandomAccessFileReader` - New field `ReadOptions/IOOptions::io_activity`; Pass `ReadOptions` through paths under db open, flush and compaction to where we can prepare `IOOptions` and pass it to `RandomAccessFileReader` - Use `thread_status_util` for assertion in `DbStressFSWrapper` for continuous testing on we are passing correct `io_activity` under db open, flush and compaction Pull Request resolved: https://github.com/facebook/rocksdb/pull/11288 Test Plan: - **Stress test** - **Db bench 1: rocksdb.sst.read.micros COUNT ≈ sum of rocksdb.file.read.flush.micros's and rocksdb.file.read.compaction.micros's.** (without blob) - May not be exactly the same due to `HistogramStat::Add` only guarantees atomic not accuracy across threads. ``` ./db_bench -db=/dev/shm/testdb/ -statistics=true -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -target_file_size_base=655 -disable_auto_compactions=false -compression_type=none -bloom_bits=3 (-use_plain_table=1 -prefix_size=10) ``` ``` // BlockBasedTable rocksdb.sst.read.micros P50 : 2.009374 P95 : 4.968548 P99 : 8.110362 P100 : 43.000000 COUNT : 40456 SUM : 114805 rocksdb.file.read.flush.micros P50 : 1.871841 P95 : 3.872407 P99 : 5.540541 P100 : 43.000000 COUNT : 2250 SUM : 6116 rocksdb.file.read.compaction.micros P50 : 2.023109 P95 : 5.029149 P99 : 8.196910 P100 : 26.000000 COUNT : 38206 SUM : 108689 // PlainTable Does not apply ``` - **Db bench 2: performance** **Read** SETUP: db with 900 files ``` ./db_bench -db=/dev/shm/testdb/ -benchmarks="fillseq" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=true -target_file_size_base=655 -compression_type=none ```run till convergence ``` ./db_bench -seed=1678564177044286 -use_existing_db=true -db=/dev/shm/testdb -benchmarks=readrandom[-X60] -statistics=true -num=1000000 -disable_auto_compactions=true -compression_type=none -bloom_bits=3 ``` Pre-change `readrandom [AVG 60 runs] : 21568 (± 248) ops/sec` Post-change (no regression, -0.3%) `readrandom [AVG 60 runs] : 21486 (± 236) ops/sec` **Compaction/Flush**run till convergence ``` ./db_bench -db=/dev/shm/testdb2/ -seed=1678564177044286 -benchmarks="fillseq[-X60]" -key_size=32 -value_size=512 -num=50000 -write_buffer_size=655 -disable_auto_compactions=false -target_file_size_base=655 -compression_type=none rocksdb.sst.read.micros COUNT : 33820 rocksdb.sst.read.flush.micros COUNT : 1800 rocksdb.sst.read.compaction.micros COUNT : 32020 ``` Pre-change `fillseq [AVG 46 runs] : 1391 (± 214) ops/sec; 0.7 (± 0.1) MB/sec` Post-change (no regression, ~-0.4%) `fillseq [AVG 46 runs] : 1385 (± 216) ops/sec; 0.7 (± 0.1) MB/sec` Reviewed By: ajkr Differential Revision: D44007011 Pulled By: hx235 fbshipit-source-id: a54c89e4846dfc9a135389edf3f3eedfea257132
2023-04-21 16:07:18 +00:00
s = w.LogAndApply(read_options, cfd, &edit, db_dir.get());
Sync dir containing CURRENT after RenameFile on CURRENT as much as possible (#10573) Summary: **Context:** Below crash test revealed a bug that directory containing CURRENT file (short for `dir_contains_current_file` below) was not always get synced after a new CURRENT is created and being called with `RenameFile` as part of the creation. This bug exposes a risk that such un-synced directory containing the updated CURRENT can’t survive a host crash (e.g, power loss) hence get corrupted. This then will be followed by a recovery from a corrupted CURRENT that we don't want. The root-cause is that a nullptr `FSDirectory* dir_contains_current_file` sometimes gets passed-down to `SetCurrentFile()` hence in those case `dir_contains_current_file->FSDirectory::FsyncWithDirOptions()` will be skipped (which otherwise will internally call`Env/FS::SyncDic()` ) ``` ./db_stress --acquire_snapshot_one_in=10000 --adaptive_readahead=1 --allow_data_in_errors=True --avoid_unnecessary_blocking_io=0 --backup_max_size=104857600 --backup_one_in=100000 --batch_protection_bytes_per_key=8 --block_size=16384 --bloom_bits=134.8015470676662 --bottommost_compression_type=disable --cache_size=8388608 --checkpoint_one_in=1000000 --checksum_type=kCRC32c --clear_column_family_one_in=0 --compact_files_one_in=1000000 --compact_range_one_in=1000000 --compaction_pri=2 --compaction_ttl=100 --compression_max_dict_buffer_bytes=511 --compression_max_dict_bytes=16384 --compression_type=zstd --compression_use_zstd_dict_trainer=1 --compression_zstd_max_train_bytes=65536 --continuous_verification_interval=0 --data_block_index_type=0 --db=$db --db_write_buffer_size=1048576 --delpercent=5 --delrangepercent=0 --destroy_db_initially=0 --disable_wal=0 --enable_compaction_filter=0 --enable_pipelined_write=1 --expected_values_dir=$exp --fail_if_options_file_error=1 --file_checksum_impl=none --flush_one_in=1000000 --get_current_wal_file_one_in=0 --get_live_files_one_in=1000000 --get_property_one_in=1000000 --get_sorted_wal_files_one_in=0 --index_block_restart_interval=4 --ingest_external_file_one_in=0 --iterpercent=10 --key_len_percent_dist=1,30,69 --level_compaction_dynamic_level_bytes=True --mark_for_compaction_one_file_in=10 --max_background_compactions=20 --max_bytes_for_level_base=10485760 --max_key=10000 --max_key_len=3 --max_manifest_file_size=16384 --max_write_batch_group_size_bytes=64 --max_write_buffer_number=3 --max_write_buffer_size_to_maintain=0 --memtable_prefix_bloom_size_ratio=0.001 --memtable_protection_bytes_per_key=1 --memtable_whole_key_filtering=1 --mmap_read=1 --nooverwritepercent=1 --open_metadata_write_fault_one_in=0 --open_read_fault_one_in=0 --open_write_fault_one_in=0 --ops_per_thread=100000000 --optimize_filters_for_memory=1 --paranoid_file_checks=1 --partition_pinning=2 --pause_background_one_in=1000000 --periodic_compaction_seconds=0 --prefix_size=5 --prefixpercent=5 --prepopulate_block_cache=1 --progress_reports=0 --read_fault_one_in=1000 --readpercent=45 --recycle_log_file_num=0 --reopen=0 --ribbon_starting_level=999 --secondary_cache_fault_one_in=32 --secondary_cache_uri=compressed_secondary_cache://capacity=8388608 --set_options_one_in=10000 --snapshot_hold_ops=100000 --sst_file_manager_bytes_per_sec=0 --sst_file_manager_bytes_per_truncate=0 --subcompactions=3 --sync_fault_injection=1 --target_file_size_base=2097 --target_file_size_multiplier=2 --test_batches_snapshots=1 --top_level_index_pinning=1 --use_full_merge_v1=1 --use_merge=1 --value_size_mult=32 --verify_checksum=1 --verify_checksum_one_in=1000000 --verify_db_one_in=100000 --verify_sst_unique_id_in_manifest=1 --wal_bytes_per_sync=524288 --write_buffer_size=4194 --writepercent=35 ``` ``` stderr: WARNING: prefix_size is non-zero but memtablerep != prefix_hash db_stress: utilities/fault_injection_fs.cc:748: virtual rocksdb::IOStatus rocksdb::FaultInjectionTestFS::RenameFile(const std::string &, const std::string &, const rocksdb::IOOptions &, rocksdb::IODebugContext *): Assertion `tlist.find(tdn.second) == tlist.end()' failed.` ``` **Summary:** The PR ensured the non-test path pass down a non-null dir containing CURRENT (which is by current RocksDB assumption just db_dir) by doing the following: - Renamed `directory_to_fsync` as `dir_contains_current_file` in `SetCurrentFile()` to tighten the association between this directory and CURRENT file - Changed `SetCurrentFile()` API to require `dir_contains_current_file` being passed-in, instead of making it by default nullptr. - Because `SetCurrentFile()`'s `dir_contains_current_file` is passed down from `VersionSet::LogAndApply()` then `VersionSet::ProcessManifestWrites()` (i.e, think about this as a chain of 3 functions related to MANIFEST update), these 2 functions also got refactored to require `dir_contains_current_file` - Updated the non-test-path callers of these 3 functions to obtain and pass in non-nullptr `dir_contains_current_file`, which by current assumption of RocksDB, is the `FSDirectory* db_dir`. - `db_impl` path will obtain `DBImpl::directories_.getDbDir()` while others with no access to such `directories_` are obtained on the fly by creating such object `FileSystem::NewDirectory(..)` and manage it by unique pointers to ensure short life time. Pull Request resolved: https://github.com/facebook/rocksdb/pull/10573 Test Plan: - `make check` - Passed the repro db_stress command - For future improvement, since we currently don't assert dir containing CURRENT to be non-nullptr due to https://github.com/facebook/rocksdb/pull/10573#pullrequestreview-1087698899, there is still chances that future developers mistakenly pass down nullptr dir containing CURRENT thus resulting skipped sync dir and cause the bug again. Therefore a smarter test (e.g, such as quoted from ajkr "(make) unsynced data loss to be dropping files corresponding to unsynced directory entries") is still needed. Reviewed By: ajkr Differential Revision: D39005886 Pulled By: hx235 fbshipit-source-id: 336fb9090d0cfa6ca3dd580db86268007dde7f5a
2022-08-30 00:35:21 +00:00
}
Add manifest fix-up utility for file temperatures (#9683) Summary: The goal of this change is to allow changes to the "current" (in FileSystem) file temperatures to feed back into DB metadata, so that they can inform decisions and stats reporting. In part because of modular code factoring, it doesn't seem easy to do this automagically, where opening an SST file and observing current Temperature different from expected would trigger a change in metadata and DB manifest write (essentially giving the deep read path access to the write path). It is also difficult to do this while the DB is open because of the limitations of LogAndApply. This change allows updating file temperature metadata on a closed DB using an experimental utility function UpdateManifestForFilesState() or `ldb update_manifest --update_temperatures`. This should suffice for "migration" scenarios where outside tooling has placed or re-arranged DB files into a (different) tiered configuration without going through RocksDB itself (currently, only compaction can change temperature metadata). Some details: * Refactored and added unit test for `ldb unsafe_remove_sst_file` because of shared functionality * Pulled in autovector.h changes from https://github.com/facebook/rocksdb/issues/9546 to fix SuperVersionContext move constructor (related to an older draft of this change) Possible follow-up work: * Support updating manifest with file checksums, such as when a new checksum function is used and want existing DB metadata updated for it. * It's possible that for some repair scenarios, lighter weight than full repair, we might want to support UpdateManifestForFilesState() to modify critical file details like size or checksum using same algorithm. But let's make sure these are differentiated from modifying file details in ways that don't suspect corruption (or require extreme trust). Pull Request resolved: https://github.com/facebook/rocksdb/pull/9683 Test Plan: unit tests added Reviewed By: jay-zhuang Differential Revision: D34798828 Pulled By: pdillinger fbshipit-source-id: cfd83e8fb10761d8c9e7f9c020d68c9106a95554
2022-03-18 23:35:51 +00:00
if (s.ok()) {
++cfs_updated;
}
}
}
if (cfs_updated > 0) {
ROCKS_LOG_INFO(db_opts.info_log,
"UpdateManifestForFilesState: updated %zu files in %zu CFs",
files_updated, cfs_updated);
} else if (s.ok()) {
ROCKS_LOG_INFO(db_opts.info_log,
"UpdateManifestForFilesState: no updates needed");
}
if (!s.ok()) {
ROCKS_LOG_ERROR(db_opts.info_log, "UpdateManifestForFilesState failed: %s",
s.ToString().c_str());
}
return s;
}
} // namespace experimental
} // namespace ROCKSDB_NAMESPACE